RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 NUP133Q8WUM0 1156 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 NSUN4Q96CB9 384 aaKnown RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 GPR75-ASB3A0A0A6YYF3 556 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 FAM196BA6NMK8 535 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L15C9J2P7 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L13C9JLJ4 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L11C9JVI0 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L18D6R9N7 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L22D6RA61 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L17D6RBQ6 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L19D6RCP7 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L20D6RJB6 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 GPR25O00155 361 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 GPAA1O43292 621 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 FGFR2P21802 821 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 ARID4AP29374 1257 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 INPP5BP32019 993 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 SLC1A4P43007 532 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 RFX5P48382 616 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 USP17L24Q0WX57 530 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 PPIL2Q13356 520 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 VGLL4Q14135 290 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 POLA2Q14181 598 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 TMEM179Q6ZVK1 233 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 SDR42E1Q8WUS8 393 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 DPF3Q92784 378 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 CUL5Q93034 780 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 GPHNQ9NQX3 736 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 PPP4R2Q9NY27 417 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 CPA4Q9UI42 421 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 NR2E3Q9Y5X4 410 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 CNTNAP1P78357 1384 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 WTIPA6NIX2 430 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 PDHXO00330 501 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 TFRCP02786 760 aaKnown RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 GLIPR1L2Q4G1C9 344 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 TMTC2Q8N394 836 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 GPATCH11Q8N954 259 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 CTCFLQ8NI51 663 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 CLIP2Q9UDT6 1046 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 PNMA2Q9UL42 364 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 CNPY2Q9Y2B0 182 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 ASTN2O75129 1339 aaPredicted RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 SLC10A3P09131 477 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 PSMC4P43686 418 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 TSHZ3Q63HK5 1081 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 KAZALD1Q96I82 304 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 NUDT12Q9BQG2 462 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 KRT23Q9C075 422 aa4.94□□□□□ -1.62
BPTF-204ENST00000342579 SEC63Q9UGP8 760 aaKnown RBP4.94□□□□□ -1.62
BPTF-204ENST00000342579 CYP2E1P05181 493 aaPredicted RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 HAND2P61296 217 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 NFIAQ12857 509 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 ANKRD35Q8N283 1001 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 NKX2-3Q8TAU0 364 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.93□□□□□ -1.62
BPTF-204ENST00000342579 CLMNQ96JQ2 1002 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 HAUS7Q99871 368 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 GZF1Q9H116 711 aaPredicted RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 CNNM2Q9H8M5 875 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PIH1D3Q9NQM4 214 aaKnown RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 RNF186Q9NXI6 227 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PATL2C9JE40 543 aaKnown RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 EGFRP00533 1210 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PRELPP51888 382 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PRMT2P55345 433 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 SETQ01105 290 aaPredicted RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 APOBEC3HQ6NTF7 200 aaKnown RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 GPRC5AQ8NFJ5 357 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 GMLQ99445 158 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 VAT1LQ9HCJ6 419 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 HELLSQ9NRZ9 838 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 FZD1Q9UP38 647 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 SALL1Q9NSC2 1324 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 IFIT3O14879 490 aaKnown RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 FOXN1O15353 648 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PRDM1O75626 825 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PSMA5P28066 241 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PDE1AP54750 535 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 TFAP4Q01664 338 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 FOXD4L6Q3SYB3 417 aaPredicted RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 TMCO4Q5TGY1 634 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 FOXD4L3Q6VB84 417 aaPredicted RBP4.93□□□□□ -1.62
BPTF-204ENST00000342579 CATIPQ7Z7H3 387 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 RASAL3Q86YV0 1011 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 KIFC2Q96AC6 838 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 HTATIP2Q9BUP3 242 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 IDI2Q9BXS1 227 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 RNF208Q9H0X6 261 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 ANTXR1Q9H6X2 564 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 EHMT1Q9H9B1 1298 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 NOD1Q9Y239 953 aa4.93□□□□□ -1.62
BPTF-204ENST00000342579 PDS5AQ29RF7 1337 aaKnown RBP4.92□□□□□ -1.62
BPTF-204ENST00000342579 SPDYE5A6NIY4 337 aa4.92□□□□□ -1.62
BPTF-204ENST00000342579 IRF6O14896 467 aa4.92□□□□□ -1.62
BPTF-204ENST00000342579 USP2O75604 605 aaPredicted RBP4.92□□□□□ -1.62
BPTF-204ENST00000342579 CYP2B6P20813 491 aa4.92□□□□□ -1.62
BPTF-204ENST00000342579 KIF5BP33176 963 aa4.92□□□□□ -1.62
BPTF-204ENST00000342579 COPB2P35606 906 aa4.92□□□□□ -1.62
BPTF-204ENST00000342579 CAP2P40123 477 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms