RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 FAM173BQ6P4H8 233 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 GDPD2Q9HCC8 539 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 TSPY2A6NKD2 308 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 PTMSP20962 102 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 TROAPQ12815 778 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 ZFPM1Q8IX07 1006 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 PHKBQ93100 1093 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 OSBPL5Q9H0X9 879 aaPredicted RBP20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 MYH4Q9Y623 1939 aa20.04■□□□□ 0.8
FRMD4A-202ENST00000342409 UBE2Q2LH0YL09 131 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 NT5C2P49902 561 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 RTN1Q16799 776 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 NBPF11Q86T75 865 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 TMEM87AQ8NBN3 555 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 NLGN2Q8NFZ4 835 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 ANKS1AQ92625 1134 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 AIFM3Q96NN9 605 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 GJB4Q9NTQ9 266 aa20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 DICER1Q9UPY3 1922 aaKnown RBP20.03■□□□□ 0.8
FRMD4A-202ENST00000342409 IFNAR1P17181 557 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 CACNB3P54284 484 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 TCP11L1Q9NUJ3 509 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
FRMD4A-202ENST00000342409 H3BQV1 296 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 PRELPP51888 382 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 GUCY1B3Q02153 619 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 IFFO2Q5TF58 517 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 USP48Q86UV5 1035 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 GPT2Q8TD30 523 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 NUP133Q8WUM0 1156 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 IDI2Q9BXS1 227 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 TAOK3Q9H2K8 898 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 ATP6V1DQ9Y5K8 247 aa20.02■□□□□ 0.79
FRMD4A-202ENST00000342409 STK36Q9NRP7 1315 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 SBF1O95248 1867 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 FUT2Q10981 343 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 PRMT6Q96LA8 375 aaPredicted RBP20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
FRMD4A-202ENST00000342409 CDKL5O76039 1030 aa20■□□□□ 0.79
FRMD4A-202ENST00000342409 FMNL1O95466 1100 aaPredicted RBP20■□□□□ 0.79
FRMD4A-202ENST00000342409 SLURP2P0DP57 97 aa20■□□□□ 0.79
FRMD4A-202ENST00000342409 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
FRMD4A-202ENST00000342409 SKOR2Q2VWA4 1001 aaPredicted RBP20■□□□□ 0.79
FRMD4A-202ENST00000342409 SH3BP5LQ7L8J4 393 aa20■□□□□ 0.79
FRMD4A-202ENST00000342409 ZNF444Q8N0Y2 327 aaPredicted RBP20■□□□□ 0.79
FRMD4A-202ENST00000342409 CMTR1Q8N1G2 835 aaKnown RBP20■□□□□ 0.79
FRMD4A-202ENST00000342409 FBXO18Q8NFZ0 1043 aa20■□□□□ 0.79
FRMD4A-202ENST00000342409 BCS1LQ9Y276 419 aa20■□□□□ 0.79
FRMD4A-202ENST00000342409 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
FRMD4A-202ENST00000342409 GADD45BO75293 160 aaPredicted RBP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 DDAH1O94760 285 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 CXCL9Q07325 125 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 CPLX2Q6PUV4 134 aaKnown RBP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 DGKHQ86XP1 1220 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 CRACR2BQ8N4Y2 399 aaPredicted RBP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 C8orf76Q96K31 380 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 TDRD3Q9H7E2 651 aaKnown RBP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 TSPY3P0CV98 308 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 TSPY8P0CW00 308 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 GUCY1A2P33402 732 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 KLHL40Q2TBA0 621 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 SLC26A6Q9BXS9 759 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 PLIN4Q96Q06 1357 aa19.99■□□□□ 0.79
FRMD4A-202ENST00000342409 PLEKHA8P1O95397 391 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 SHMT1P34896 483 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 NOVP48745 357 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 ALG1Q9BT22 464 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 ZSCAN16Q9H4T2 348 aaPredicted RBP19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 LTBP3Q9NS15 1303 aa19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 DDX49Q9Y6V7 483 aaKnown RBP19.98■□□□□ 0.79
FRMD4A-202ENST00000342409 DDTLA6NHG4 134 aaPredicted RBP19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 RASSF7Q02833 373 aa19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 SSRP1Q08945 709 aaKnown RBP19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 RGS22Q8NE09 1264 aa19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 DNAJC18Q9H819 358 aa19.97■□□□□ 0.79
FRMD4A-202ENST00000342409 CCDC196A0A1B0GTZ2 297 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 SPDYE2BA6NHP3 402 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 FIBPO43427 364 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 SPDYE6P0CI01 402 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 TCP10Q12799 353 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 GZF1Q9H116 711 aaPredicted RBP19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 SERPINB13Q9UIV8 391 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms