RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
PKN1-202ENST00000342216 HAUS2Q9NVX0 235 aa16.94■□□□□ 0.3
PKN1-202ENST00000342216 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
PKN1-202ENST00000342216 GYPCP04921 128 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 SLC7A5Q01650 507 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 KIF23Q02241 960 aaPredicted RBP16.93■□□□□ 0.3
PKN1-202ENST00000342216 TRAPPC11Q7Z392 1133 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 TSEN2Q8NCE0 465 aaKnown RBP16.93■□□□□ 0.3
PKN1-202ENST00000342216 PARD3BQ8TEW8 1205 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 RBM28Q9NW13 759 aaKnown RBP16.93■□□□□ 0.3
PKN1-202ENST00000342216 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 ENO4A6NNW6 628 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 PDE2AO00408 941 aaPredicted RBP16.93■□□□□ 0.3
PKN1-202ENST00000342216 MYO1BO43795 1136 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 ERCC3P19447 782 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 MATR3P43243 847 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■■□ 20.3
PKN1-202ENST00000342216 TBC1D31Q96DN5 1066 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 SH3BP1Q9Y3L3 701 aa16.93■□□□□ 0.3
PKN1-202ENST00000342216 KRT14P02533 472 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 ACCSLQ4AC99 568 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 PARP9Q8IXQ6 854 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 ZNF473Q8WTR7 871 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 AIDAQ96BJ3 306 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 ZBTB10Q96DT7 871 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 TPX2Q9ULW0 747 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 KLHL33A6NCF5 533 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 E7EWF7 191 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 EXOSC10Q01780 885 aaKnown RBP16.92■□□□□ 0.3
PKN1-202ENST00000342216 CYB5D1Q6P9G0 228 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 RUFY1Q96T51 708 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 MYH8P13535 1937 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 LSP1P33241 339 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 AMPHP49418 695 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 PPARAQ07869 468 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 SPDL1Q96EA4 605 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 CHP1Q99653 195 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 SAR1BQ9Y6B6 198 aa16.92■□□□□ 0.3
PKN1-202ENST00000342216 MCM3P25205 808 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 GRIN1Q05586 938 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 SMYD4Q8IYR2 804 aaPredicted RBP16.91■□□□□ 0.3
PKN1-202ENST00000342216 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
PKN1-202ENST00000342216 GOLGA8KD6RF30 607 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 HAND2P61296 217 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 SUCLG2Q96I99 432 aa16.91■□□□□ 0.3
PKN1-202ENST00000342216 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 CPLX1O14810 134 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 BACH1O14867 736 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 CASP1P29466 404 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 GRIK3Q13003 919 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 SNX1Q13596 522 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 ARMC3Q5W041 872 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
PKN1-202ENST00000342216 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
PKN1-202ENST00000342216 DMGDHQ9UI17 866 aaKnown RBP16.9■□□□□ 0.3
PKN1-202ENST00000342216 POSTNQ15063 836 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 JAKMIP2Q96AA8 810 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 THOC1Q96FV9 657 aaKnown RBP16.9■□□□□ 0.3
PKN1-202ENST00000342216 SERTAD1Q9UHV2 236 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 FAM184BQ9ULE4 1060 aa16.9■□□□□ 0.3
PKN1-202ENST00000342216 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
PKN1-202ENST00000342216 MPHOSPH10O00566 681 aaKnown RBP16.89■□□□□ 0.3
PKN1-202ENST00000342216 RXRAP19793 462 aa16.89■□□□□ 0.3
PKN1-202ENST00000342216 RESP18Q5W5W9 173 aa16.89■□□□□ 0.3
PKN1-202ENST00000342216 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.3
PKN1-202ENST00000342216 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.3
PKN1-202ENST00000342216 ARMC2Q8NEN0 867 aa16.89■□□□□ 0.3
PKN1-202ENST00000342216 AENQ8WTP8 325 aaKnown RBP16.89■□□□□ 0.3
PKN1-202ENST00000342216 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.3
PKN1-202ENST00000342216 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.3
PKN1-202ENST00000342216 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
PKN1-202ENST00000342216 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 NNTQ13423 1086 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
PKN1-202ENST00000342216 KCNQ3O43525 872 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
PKN1-202ENST00000342216 TLDC1Q6P9B6 456 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 VPS37DQ86XT2 251 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 FUKQ8N0W3 1084 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
PKN1-202ENST00000342216 E7EVH7 732 aa16.88■□□□□ 0.29
PKN1-202ENST00000342216 ZKSCAN8Q15776 578 aaPredicted RBP16.88■□□□□ 0.29
PKN1-202ENST00000342216 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
PKN1-202ENST00000342216 ZNF274Q96GC6 653 aaPredicted RBP16.88■□□□□ 0.29
PKN1-202ENST00000342216 EYA1Q99502 592 aa16.88■□□□□ 0.29
PKN1-202ENST00000342216 PPANQ9NQ55 473 aaKnown RBP16.88■□□□□ 0.29
PKN1-202ENST00000342216 SPATS2LQ9NUQ6 558 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms