RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NEURL1BA8MQ27 555 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 RPSAP08865 295 aaKnown RBP14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 NOSTRINQ8IVI9 506 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 SBNO1A3KN83 1393 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 PEX19P40855 299 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 KIF23Q02241 960 aaPredicted RBP14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 NYAP1Q6ZVC0 841 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 HEATR3Q7Z4Q2 680 aa14.04□□□□□ -0.16
SSX2IP-201ENST00000342203 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 ZNF790Q6PG37 636 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 CCDC25Q86WR0 208 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 ARMT1Q9H993 441 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 POLD4Q9HCU8 107 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 CXCR5P32302 372 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 SPATA1Q5VX52 437 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 TRMT1LQ7Z2T5 733 aaKnown RBP14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 DEXIO95424 95 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 STARD3NLO95772 234 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 KRT13P13646 458 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 CASP1P29466 404 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 TRIM14Q14142 442 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 DTHD1Q6ZMT9 781 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 TADA2BQ86TJ2 420 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 C2CD5Q86YS7 1000 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 HAUS7Q99871 368 aa14.03□□□□□ -0.16
SSX2IP-201ENST00000342203 HOXB7P09629 217 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 MAN1B1Q9UKM7 699 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 KCNJ18B7U540 433 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 SRGAP2O75044 1071 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 KCNJ12Q14500 433 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 IFT20Q8IY31 132 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 TMEM87BQ96K49 555 aa14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.16
SSX2IP-201ENST00000342203 KIF4AO95239 1232 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 TNNC1P63316 161 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 PDE4DQ08499 809 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 RAPGEF1Q13905 1077 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 GIGYF2Q6Y7W6 1299 aaKnown RBP14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 ZNF496Q96IT1 587 aaPredicted RBP14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 SELENOOQ9BVL4 669 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 KAT14Q9H8E8 782 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 TMEM266Q2M3C6 531 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 HAUS4Q9H6D7 363 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 FHOD1Q9Y613 1164 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 ARHGEF5Q12774 1597 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 PLCD1P51178 756 aa14.02□□□□□ -0.17
SSX2IP-201ENST00000342203 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 TTC38Q5R3I4 469 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 BUB1O43683 1085 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 KIF5BP33176 963 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 SLC7A5Q01650 507 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 MMS22LQ6ZRQ5 1243 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 CCDC155Q8N6L0 562 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 MYOM2P54296 1465 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 CYP27A1Q02318 531 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 NR5A1Q13285 461 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 TBC1D31Q96DN5 1066 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 C2orf54Q08AI8 447 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 MORC3Q14149 939 aa14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
SSX2IP-201ENST00000342203 ATP10DQ9P241 1426 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 VSNL1P62760 191 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 ZRSR2Q15696 482 aaKnown RBP14□□□□□ -0.17
SSX2IP-201ENST00000342203 KRT71Q3SY84 523 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 SAMD15Q9P1V8 674 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 PLXNC1O60486 1568 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 FOXN1O15353 648 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 CEP104O60308 925 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 PDCLQ13371 301 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 MCTP2Q6DN12 878 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 RAB34Q9BZG1 259 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 FAM169AQ9Y6X4 670 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 N4BP1O75113 896 aaKnown RBP14□□□□□ -0.17
SSX2IP-201ENST00000342203 RPAINQ86UA6 219 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 CCDC51Q96ER9 411 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 PAK2Q13177 524 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 PPP1R7Q15435 360 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 CSRNP2Q9H175 543 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 KCNK9Q9NPC2 374 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 TEX33O43247 280 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 CCDC6Q16204 474 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 ANKLE2Q86XL3 938 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 FBF1Q8TES7 1133 aa14□□□□□ -0.17
SSX2IP-201ENST00000342203 CDC25AP30304 524 aa13.99□□□□□ -0.17
SSX2IP-201ENST00000342203 SARNPP82979 210 aaKnown RBP13.99□□□□□ -0.17
SSX2IP-201ENST00000342203 PPP2R5AQ15172 486 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms