RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
PMS1-201ENST00000342075 JAG1P78504 1218 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 UBAC1Q9BSL1 405 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 MYO1BO43795 1136 aa16.33■□□□□ 0.21
PMS1-201ENST00000342075 GDF11O95390 407 aa16.33■□□□□ 0.21
PMS1-201ENST00000342075 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.21
PMS1-201ENST00000342075 RASA3Q14644 834 aa16.33■□□□□ 0.21
PMS1-201ENST00000342075 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.21
PMS1-201ENST00000342075 GGA3Q9NZ52 723 aa16.33■□□□□ 0.21
PMS1-201ENST00000342075 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
PMS1-201ENST00000342075 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
PMS1-201ENST00000342075 SEC23AQ15436 765 aa16.33■□□□□ 0.2
PMS1-201ENST00000342075 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
PMS1-201ENST00000342075 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
PMS1-201ENST00000342075 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.2
PMS1-201ENST00000342075 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
PMS1-201ENST00000342075 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
PMS1-201ENST00000342075 JAK2O60674 1132 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 MCM2P49736 904 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
PMS1-201ENST00000342075 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 CUL4AQ13619 759 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
PMS1-201ENST00000342075 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
PMS1-201ENST00000342075 ENTPD3O75355 529 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 WTAPQ15007 396 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
PMS1-201ENST00000342075 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 ATRNL1Q5VV63 1379 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 UBE2Q2LH0YL09 131 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 MPHOSPH10O00566 681 aaKnown RBP16.31■□□□□ 0.2
PMS1-201ENST00000342075 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 TMEM87BQ96K49 555 aa16.31■□□□□ 0.2
PMS1-201ENST00000342075 CDC27P30260 824 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 TEPSINQ96N21 525 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 DEFB129Q9H1M3 183 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
PMS1-201ENST00000342075 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
PMS1-201ENST00000342075 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
PMS1-201ENST00000342075 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
PMS1-201ENST00000342075 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
PMS1-201ENST00000342075 POTECB2RU33 542 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 FOSBP53539 338 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
PMS1-201ENST00000342075 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
PMS1-201ENST00000342075 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
PMS1-201ENST00000342075 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
PMS1-201ENST00000342075 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 ERICH2A1L162 156 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 GLTPD2A6NH11 291 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 DDIT3P35638 169 aa16.29■□□□□ 0.2
PMS1-201ENST00000342075 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
PMS1-201ENST00000342075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
PMS1-201ENST00000342075 PFKFB2O60825 505 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 EHD4Q9H223 541 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 PCNTO95613 3336 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 EVCP57679 992 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
PMS1-201ENST00000342075 FAM217BQ9NTX9 383 aaPredicted RBP16.28■□□□□ 0.2
PMS1-201ENST00000342075 ADM5C9JUS6 153 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 LIFRP42702 1097 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 PRKG1Q13976 671 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 EAPPQ56P03 285 aaPredicted RBP16.27■□□□□ 0.2
PMS1-201ENST00000342075 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 ADARB2Q9NS39 739 aaKnown RBP16.27■□□□□ 0.2
PMS1-201ENST00000342075 GJB2P29033 226 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
PMS1-201ENST00000342075 FAM83AQ86UY5 434 aa16.27■□□□□ 0.2
PMS1-201ENST00000342075 LRRC47Q8N1G4 583 aaKnown RBP16.27■□□□□ 0.2
PMS1-201ENST00000342075 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
PMS1-201ENST00000342075 ZBTB43O43298 467 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms