RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 PCDHB6Q9Y5E3 794 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 MBD4O95243 580 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 PCCAP05165 728 aaPredicted RBP17.46■□□□□ 0.39
PERM1-201ENST00000341290 PLA2G4AP47712 749 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 TMEM139Q8IV31 216 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 ZCCHC17Q9NP64 241 aaKnown RBP17.46■□□□□ 0.39
PERM1-201ENST00000341290 COL24A1Q17RW2 1714 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 CUTAO60888 179 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 STX17P56962 302 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 NAPBQ9H115 298 aa17.46■□□□□ 0.39
PERM1-201ENST00000341290 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
PERM1-201ENST00000341290 POSTNQ15063 836 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
PERM1-201ENST00000341290 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
PERM1-201ENST00000341290 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 SMIM22K7EJ46 135 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 CSF1RP07333 972 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 CASQ1P31415 396 aa17.45■□□□□ 0.38
PERM1-201ENST00000341290 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
PERM1-201ENST00000341290 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 TADA3O75528 432 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 AFMP43652 599 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 LZTFL1Q9NQ48 299 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
PERM1-201ENST00000341290 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
PERM1-201ENST00000341290 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 MED15Q96RN5 788 aa17.44■□□□□ 0.38
PERM1-201ENST00000341290 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
PERM1-201ENST00000341290 ZSCAN12O43309 604 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 KCNJ6P48051 423 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 MDM2Q00987 491 aaPredicted RBP17.43■□□□□ 0.38
PERM1-201ENST00000341290 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
PERM1-201ENST00000341290 TC2NQ8N9U0 490 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 MYO5AQ9Y4I1 1855 aaKnown RBP17.43■□□□□ 0.38
PERM1-201ENST00000341290 ARHGAP6O43182 974 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 CCP110O43303 1012 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
PERM1-201ENST00000341290 CREBRFQ8IUR6 639 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
PERM1-201ENST00000341290 ARGLU1Q9NWB6 273 aaPredicted RBP17.43■□□□□ 0.38
PERM1-201ENST00000341290 SOWAHDA6NJG2 315 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 PLSCR1O15162 318 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 PDE8BO95263 885 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
PERM1-201ENST00000341290 CTSWP56202 376 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 SAFBQ15424 915 aaKnown RBP eCLIP17.42■□□□□ 0.38
PERM1-201ENST00000341290 STAMQ92783 540 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.42■□□□□ 0.38
PERM1-201ENST00000341290 TEX33O43247 280 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TDO2P48775 406 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 SPECC1LQ69YQ0 1117 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 DHX58Q96C10 678 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 A0A0G2JS52 829 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TULP2O00295 520 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 SASH3O75995 380 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 MMP1P03956 469 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 GYS2P54840 703 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
PERM1-201ENST00000341290 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
PERM1-201ENST00000341290 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
PERM1-201ENST00000341290 TCRBV5S4A2TA0A5A2 114 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 KCNQ2O43526 872 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 CSRNP2Q9H175 543 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 MRPL44Q9H9J2 332 aaKnown RBP17.41■□□□□ 0.38
PERM1-201ENST00000341290 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
PERM1-201ENST00000341290 TFRCP02786 760 aaKnown RBP17.41■□□□□ 0.38
PERM1-201ENST00000341290 PPP2R3AQ06190 1150 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 SLC20A2Q08357 652 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 RTN1Q16799 776 aa17.41■□□□□ 0.38
PERM1-201ENST00000341290 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
PERM1-201ENST00000341290 RGL2O15211 777 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 PRDM1O75626 825 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 ZRANB2O95218 330 aaKnown RBP eCLIP17.4■□□□□ 0.38
PERM1-201ENST00000341290 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 EFCAB8A8MWE9 144 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 RASGRF1Q13972 1273 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 LCORLQ8N3X6 602 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 NEK11Q8NG66 645 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
PERM1-201ENST00000341290 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms