RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CAMK4Q16566 473 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 MB21D2Q8IYB1 491 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 EYA3Q99504 573 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
BRAT1-201ENST00000340611 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-201ENST00000340611 CLGNO14967 610 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
BRAT1-201ENST00000340611 GJB2P29033 226 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 PPARAQ07869 468 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 BCS1LQ9Y276 419 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-201ENST00000340611 RAD17O75943 681 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 NCOA7Q8NI08 942 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
BRAT1-201ENST00000340611 COL4A5P29400 1685 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 SLURP2P0DP57 97 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 TNNT1P13805 278 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 USP5P45974 858 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 MROH7-TTC4A0A0A0MT08 1334 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 GNAT2P19087 354 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 FAM173BQ6P4H8 233 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 FAM205AQ6ZU69 1335 aa17.42■□□□□ 0.38
BRAT1-201ENST00000340611 FOSBP53539 338 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 CACNB3P54284 484 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
BRAT1-201ENST00000340611 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 JAK2O60674 1132 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 LRMPQ12912 555 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 TRDNQ13061 729 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 PICALMQ13492 652 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 ALX1Q15699 326 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 SYT10Q6XYQ8 523 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 LUZP1Q86V48 1076 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 CCDC144CPQ8IYA2 1237 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 MYL10Q9BUA6 226 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 DAGLAQ9Y4D2 1042 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 ATP6V1DQ9Y5K8 247 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 POLR3GO15318 223 aaPredicted RBP17.41■□□□□ 0.38
BRAT1-201ENST00000340611 NOP2P46087 812 aaKnown RBP17.41■□□□□ 0.38
BRAT1-201ENST00000340611 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
BRAT1-201ENST00000340611 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
BRAT1-201ENST00000340611 CCDC192P0DO97 292 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 CYP2C19P33261 490 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 SLC44A5Q8NCS7 719 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
BRAT1-201ENST00000340611 SCRN1Q12765 414 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 YY1AP1Q9H869 796 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 LCMT1Q9UIC8 334 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 SMTNL1A8MU46 457 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 RBM5P52756 815 aaKnown RBP eCLIP17.39■□□□□ 0.37
BRAT1-201ENST00000340611 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
BRAT1-201ENST00000340611 FBXO38Q6PIJ6 1188 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 TBC1D22AQ8WUA7 517 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 NRBP1Q9UHY1 535 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
BRAT1-201ENST00000340611 GOLGA6L6A8MZA4 724 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 LIG1P18858 919 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 PLCD1P51178 756 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 CCDC186Q7Z3E2 898 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
BRAT1-201ENST00000340611 NMT2O60551 498 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
BRAT1-201ENST00000340611 RHBDL3P58872 404 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 BANK1Q8NDB2 785 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 ZNF397Q8NF99 534 aaPredicted RBP17.38■□□□□ 0.37
BRAT1-201ENST00000340611 CDK5RAP2Q96SN8 1893 aa17.38■□□□□ 0.37
BRAT1-201ENST00000340611 KLF18A0A0U1RQI7 1052 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 GSTO1P78417 241 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 ELF2Q15723 593 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 KRBA2Q6ZNG9 492 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 BAG3O95817 575 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 FAM193AP78312 1265 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 RASSF7Q02833 373 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 GPR75-ASB3A0A0A6YYF3 556 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 TGFB2P61812 414 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms