RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PTPRFP10586 1907 aa18.58■□□□□ 0.56
VAPA-201ENST00000340541 PRKAB2O43741 272 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 JAG1P78504 1218 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 NUCB1Q02818 461 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 MOGSQ13724 837 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 SLC4A8Q2Y0W8 1093 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 FASTKD5Q7L8L6 764 aaKnown RBP18.57■□□□□ 0.56
VAPA-201ENST00000340541 SDR42E1Q8WUS8 393 aa18.57■□□□□ 0.56
VAPA-201ENST00000340541 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
VAPA-201ENST00000340541 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
VAPA-201ENST00000340541 ADGRA2Q96PE1 1338 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 CAP2P40123 477 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 EVX2Q03828 476 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 CCDC84Q86UT8 332 aaPredicted RBP18.56■□□□□ 0.56
VAPA-201ENST00000340541 CHD1LQ86WJ1 897 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 ARHGAP39Q9C0H5 1083 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 EHD4Q9H223 541 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 SLC45A1Q9Y2W3 748 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 AFG3L2Q9Y4W6 797 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 ZHX2Q9Y6X8 837 aa18.56■□□□□ 0.56
VAPA-201ENST00000340541 BAZ2AQ9UIF9 1905 aaKnown RBP18.55■□□□□ 0.56
VAPA-201ENST00000340541 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
VAPA-201ENST00000340541 PSMC4P43686 418 aa18.55■□□□□ 0.56
VAPA-201ENST00000340541 PLCD1P51178 756 aa18.55■□□□□ 0.56
VAPA-201ENST00000340541 OSBP2Q969R2 916 aa18.55■□□□□ 0.56
VAPA-201ENST00000340541 PARK7Q99497 189 aaKnown RBP18.55■□□□□ 0.56
VAPA-201ENST00000340541 SRRDQ9UH36 339 aa18.55■□□□□ 0.56
VAPA-201ENST00000340541 CPA4Q9UI42 421 aa18.55■□□□□ 0.56
VAPA-201ENST00000340541 ZFYP08048 801 aaPredicted RBP18.54■□□□□ 0.56
VAPA-201ENST00000340541 SHROOM1Q2M3G4 852 aaPredicted RBP18.54■□□□□ 0.56
VAPA-201ENST00000340541 GPAT2Q6NUI2 795 aa18.54■□□□□ 0.56
VAPA-201ENST00000340541 TTC6Q86TZ1 520 aa18.54■□□□□ 0.56
VAPA-201ENST00000340541 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
VAPA-201ENST00000340541 APPBP2Q92624 585 aa18.54■□□□□ 0.56
VAPA-201ENST00000340541 MCM9Q9NXL9 1143 aa18.54■□□□□ 0.56
VAPA-201ENST00000340541 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
VAPA-201ENST00000340541 MKI67P46013 3256 aaKnown RBP18.54■□□□□ 0.56
VAPA-201ENST00000340541 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
VAPA-201ENST00000340541 GABPAQ06546 454 aa18.53■□□□□ 0.56
VAPA-201ENST00000340541 TATDN1Q6P1N9 297 aa18.53■□□□□ 0.56
VAPA-201ENST00000340541 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
VAPA-201ENST00000340541 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
VAPA-201ENST00000340541 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
VAPA-201ENST00000340541 ATP8A2Q9NTI2 1148 aa18.53■□□□□ 0.56
VAPA-201ENST00000340541 FMNL1O95466 1100 aaPredicted RBP18.52■□□□□ 0.56
VAPA-201ENST00000340541 CYP2D6P10635 497 aa18.52■□□□□ 0.56
VAPA-201ENST00000340541 BCRP11274 1271 aa18.52■□□□□ 0.56
VAPA-201ENST00000340541 PLEKHM2Q8IWE5 1019 aa18.52■□□□□ 0.56
VAPA-201ENST00000340541 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.56
VAPA-201ENST00000340541 SH3TC2Q8TF17 1288 aa18.52■□□□□ 0.56
VAPA-201ENST00000340541 SMIM22K7EJ46 135 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 M0R2C6 588 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 GDF11O95390 407 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
VAPA-201ENST00000340541 OSBPP22059 807 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 CTGFP29279 349 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 GRK4P32298 578 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 SHMT1P34896 483 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 FCGRTP55899 365 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 RAET1EQ8TD07 263 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 FSD1Q9BTV5 496 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 TRIM34Q9BYJ4 488 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 TBC1D2Q9BYX2 928 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 ZBTB21Q9ULJ3 1066 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
VAPA-201ENST00000340541 LOC285556D6RIA3 1793 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 ASNSP08243 561 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 CAPN2P17655 700 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 HABP4Q5JVS0 413 aaKnown RBP18.5■□□□□ 0.55
VAPA-201ENST00000340541 ZMYM1Q5SVZ6 1142 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 EVI5LQ96CN4 794 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 SEC62Q99442 399 aaKnown RBP18.5■□□□□ 0.55
VAPA-201ENST00000340541 GINM1Q9NU53 330 aa18.5■□□□□ 0.55
VAPA-201ENST00000340541 BRCA2P51587 3418 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 USP17L5A8MUK1 530 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 GSG1L2A8MUP6 293 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 GPAA1O43292 621 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 SPP2Q13103 211 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 LRRFIP1Q32MZ4 808 aaKnown RBP18.49■□□□□ 0.55
VAPA-201ENST00000340541 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 WDR18Q9BV38 432 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 MYPNQ86TC9 1320 aa18.49■□□□□ 0.55
VAPA-201ENST00000340541 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 USP17L21D6R901 530 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 GH2P01242 217 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 CYP2C8P10632 490 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 PDE4AP27815 886 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
VAPA-201ENST00000340541 EPB41L4AQ9HCS5 686 aaPredicted RBP18.48■□□□□ 0.55
VAPA-201ENST00000340541 ZSWIM8A7E2V4 1837 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 GJB1P08034 283 aa18.47■□□□□ 0.55
VAPA-201ENST00000340541 UBXN2AP68543 259 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms