RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 FBXO46Q6PJ61 603 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-203ENST00000340192 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
ERCC1-203ENST00000340192 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-203ENST00000340192 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 GINM1Q9NU53 330 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 HPS5Q9UPZ3 1129 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 ADGRA2Q96PE1 1338 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
ERCC1-203ENST00000340192 CYP2C8P10632 490 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 HMGCS2P54868 508 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 EVX2Q03828 476 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 PROCA1Q8NCQ7 364 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-203ENST00000340192 WDR18Q9BV38 432 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 EFCC1Q9HA90 598 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 AGTPBP1Q9UPW5 1226 aa17.6■□□□□ 0.41
ERCC1-203ENST00000340192 RNF113AO15541 343 aaKnown RBP17.59■□□□□ 0.41
ERCC1-203ENST00000340192 GH2P01242 217 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 IGHDP01880 384 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 CYP2D6P10635 497 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 SHMT1P34896 483 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 GABPAQ06546 454 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 MTMR2Q13614 643 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 CERKLQ49MI3 558 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-203ENST00000340192 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
ERCC1-203ENST00000340192 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-203ENST00000340192 LACTBP83111 547 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-203ENST00000340192 SH3D19Q5HYK7 790 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 APPBP2Q92624 585 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 OSBP2Q969R2 916 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 ARHGAP39Q9C0H5 1083 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 MGAMO43451 1857 aa17.58■□□□□ 0.4
ERCC1-203ENST00000340192 BACE1P56817 501 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 KIF22Q14807 665 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 ARHGEF6Q15052 776 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 STRBPQ96SI9 672 aaKnown RBP17.57■□□□□ 0.4
ERCC1-203ENST00000340192 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 PTPN22Q9Y2R2 807 aa17.57■□□□□ 0.4
ERCC1-203ENST00000340192 USP17L10C9JJH3 530 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 USP17L21D6R901 530 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 BCRP11274 1271 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 PDE1AP54750 535 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
ERCC1-203ENST00000340192 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 LRRFIP1Q32MZ4 808 aaKnown RBP17.56■□□□□ 0.4
ERCC1-203ENST00000340192 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 SMCR8Q8TEV9 937 aaPredicted RBP17.56■□□□□ 0.4
ERCC1-203ENST00000340192 DYNLL2Q96FJ2 89 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
ERCC1-203ENST00000340192 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 ECM2O94769 699 aaPredicted RBP17.55■□□□□ 0.4
ERCC1-203ENST00000340192 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 CTR9Q6PD62 1173 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 SLC44A5Q8NCS7 719 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 CABP5Q9NP86 173 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 TMOD4Q9NZQ9 345 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
ERCC1-203ENST00000340192 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
ERCC1-203ENST00000340192 M0R2C6 588 aa17.54■□□□□ 0.4
ERCC1-203ENST00000340192 CTGFP29279 349 aa17.54■□□□□ 0.4
ERCC1-203ENST00000340192 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■■□□ 17.8
ERCC1-203ENST00000340192 SWAP70Q9UH65 585 aa17.54■□□□□ 0.4
ERCC1-203ENST00000340192 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
ERCC1-203ENST00000340192 GSG1L2A8MUP6 293 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
ERCC1-203ENST00000340192 GPAA1O43292 621 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 GNRH1P01148 92 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 PSMC4P43686 418 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 NUCB1Q02818 461 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 TRIM47Q96LD4 638 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
ERCC1-203ENST00000340192 ASCC2Q9H1I8 757 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-203ENST00000340192 BRCA2P51587 3418 aa17.53■□□□□ 0.4
ERCC1-203ENST00000340192 GNAT2P19087 354 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 OSBPP22059 807 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 SOX10P56693 466 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 SEPT2Q15019 361 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 ZYXQ15942 572 aaKnown RBP17.52■□□□□ 0.4
ERCC1-203ENST00000340192 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 GIMAP6Q6P9H5 292 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 USP17L2Q6R6M4 530 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 EVI5LQ96CN4 794 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 FEZ1Q99689 392 aa17.52■□□□□ 0.4
ERCC1-203ENST00000340192 EMILIN3Q9NT22 766 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms