RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TCP11L1Q9NUJ3 509 aa9.21□□□□□ -0.94
TMC1-202ENST00000340019 IFIT3O14879 490 aaKnown RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 PDIA3P30101 505 aaKnown RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 SHMT1P34896 483 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 IQCA1Q86XH1 822 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 FOXP4Q8IVH2 680 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 ZNF444Q8N0Y2 327 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 ENAHQ8N8S7 591 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 IL17RBQ9NRM6 502 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 ASTN2O75129 1339 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 TNKSO95271 1327 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 PFKFB2O60825 505 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 SLURP2P0DP57 97 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 HIRAP54198 1017 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 TFAP4Q01664 338 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 SART3Q15020 963 aaKnown RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 GTF3C6Q969F1 213 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 UBAC1Q9BSL1 405 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 HACL1Q9UJ83 578 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 PLIN4Q96Q06 1357 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 SCN4AP35499 1836 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 NMT2O60551 498 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 SCRN1Q12765 414 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
TMC1-202ENST00000340019 TMTC2Q8N394 836 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 NECAB1Q8N987 351 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
TMC1-202ENST00000340019 TMEM39BQ9GZU3 492 aa9.2□□□□□ -0.94
TMC1-202ENST00000340019 KLF18A0A0U1RQI7 1052 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 ERICH2A1L162 156 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 TSPY3P0CV98 308 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 TSPY8P0CW00 308 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 NOVP48745 357 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 WTAPQ15007 396 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 RCSD1Q6JBY9 416 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 APOA5Q6Q788 366 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 CCDC83Q8IWF9 413 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 ANKS1AQ92625 1134 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 ADARB2Q9NS39 739 aaKnown RBP9.19□□□□□ -0.94
TMC1-202ENST00000340019 POLR2AP24928 1970 aaKnown RBP9.19□□□□□ -0.94
TMC1-202ENST00000340019 NID2Q14112 1375 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 HSP90AA1P07900 732 aaKnown RBP9.19□□□□□ -0.94
TMC1-202ENST00000340019 TNNI2P48788 182 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 MAP3K10Q02779 954 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 TNFAIP1Q13829 316 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 RASA3Q14644 834 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 TEPSINQ96N21 525 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 SLKQ9H2G2 1235 aaPredicted RBP9.19□□□□□ -0.94
TMC1-202ENST00000340019 FOXD4L1Q9NU39 408 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 HERC5Q9UII4 1024 aaKnown RBP9.19□□□□□ -0.94
TMC1-202ENST00000340019 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
TMC1-202ENST00000340019 TBC1D12O60347 775 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 STK3Q13188 491 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 DGKHQ86XP1 1220 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 POTEDQ86YR6 584 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 RNF216Q9NWF9 866 aaPredicted RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 IGKV6D-41A0A0C4DH26 115 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 AKR1B1P15121 316 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 HOXD11P31277 338 aaPredicted RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 RCAN1P53805 252 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 IFIT1BQ5T764 474 aaKnown RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 ANGEL2Q5VTE6 544 aaKnown RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 CRACR2BQ8N4Y2 399 aaPredicted RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 SLC12A7Q9Y666 1083 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 CCDC69A6NI79 296 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 GOLGA8BA8MQT2 603 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 CCDC178Q5BJE1 867 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 APOBEC3FQ8IUX4 373 aaKnown RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 CCDC17Q96LX7 622 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
TMC1-202ENST00000340019 SCAF8Q9UPN6 1271 aaKnown RBP9.18□□□□□ -0.94
TMC1-202ENST00000340019 PITPNM2Q9BZ72 1349 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 CTDNEP1O95476 244 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 CCT2P78371 535 aaKnown RBP9.17□□□□□ -0.94
TMC1-202ENST00000340019 NFXL1Q6ZNB6 911 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 ZBTB43O43298 467 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 TROAPQ12815 778 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 RRP1BQ14684 758 aaKnown RBP9.17□□□□□ -0.94
TMC1-202ENST00000340019 ZNF654Q8IZM8 581 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 LLPHQ9BRT6 129 aaKnown RBP9.17□□□□□ -0.94
TMC1-202ENST00000340019 NCOA5Q9HCD5 579 aaKnown RBP9.17□□□□□ -0.94
TMC1-202ENST00000340019 FAM217BQ9NTX9 383 aaPredicted RBP9.17□□□□□ -0.94
TMC1-202ENST00000340019 GGA3Q9NZ52 723 aa9.17□□□□□ -0.94
TMC1-202ENST00000340019 MYH4Q9Y623 1939 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 POTECB2RU33 542 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 CERKLQ49MI3 558 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms