RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSRP1-201ENST00000340006 ROBO3Q96MS0 1386 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 RASA1P20936 1047 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 SHMT1P34896 483 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 METTL16Q86W50 562 aaKnown RBP17.4■□□□□ 0.38
CSRP1-201ENST00000340006 TCEANC2Q96MN5 208 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 ZKSCAN3Q9BRR0 538 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 RPS6KB1P23443 525 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 CDCA5Q96FF9 252 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 DNAJC18Q9H819 358 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 ERICH2A1L162 156 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 PRC1O43663 620 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 PPP1R12BO60237 982 aaPredicted RBP17.39■□□□□ 0.37
CSRP1-201ENST00000340006 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
CSRP1-201ENST00000340006 TATDN1Q6P1N9 297 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 IL17RAQ96F46 866 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 CCDC17Q96LX7 622 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 ZNF408Q9H9D4 720 aa17.39■□□□□ 0.37
CSRP1-201ENST00000340006 COL9A3Q14050 684 aaPredicted RBP17.38■□□□□ 0.37
CSRP1-201ENST00000340006 SART3Q15020 963 aaKnown RBP17.38■□□□□ 0.37
CSRP1-201ENST00000340006 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
CSRP1-201ENST00000340006 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
CSRP1-201ENST00000340006 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
CSRP1-201ENST00000340006 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
CSRP1-201ENST00000340006 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
CSRP1-201ENST00000340006 FZD1Q9UP38 647 aa17.38■□□□□ 0.37
CSRP1-201ENST00000340006 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 TRAF5O00463 557 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 IFIT3O14879 490 aaKnown RBP17.37■□□□□ 0.37
CSRP1-201ENST00000340006 ST18O60284 1047 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 GDF11O95390 407 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 EXOSC10Q01780 885 aaKnown RBP17.37■□□□□ 0.37
CSRP1-201ENST00000340006 MAP3K10Q02779 954 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
CSRP1-201ENST00000340006 AKR1B1P15121 316 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 Q6ZUG5 572 aa17.37■□□□□ 0.37
CSRP1-201ENST00000340006 NT5C2P49902 561 aa17.36■□□□□ 0.37
CSRP1-201ENST00000340006 NMT2O60551 498 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 TMEM67Q5HYA8 995 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 NEDD1Q8NHV4 660 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 GH2P01242 217 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 CAP2P40123 477 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 ANTXR2P58335 489 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 BECN1Q14457 450 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 TMEM87BQ96K49 555 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 LARP6Q9BRS8 491 aaKnown RBP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
CSRP1-201ENST00000340006 ANGEL1Q9UNK9 670 aaKnown RBP17.35■□□□□ 0.37
CSRP1-201ENST00000340006 PHF20L1A8MW92 1017 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 KIF3CO14782 793 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 RRP1BQ14684 758 aaKnown RBP17.34■□□□□ 0.37
CSRP1-201ENST00000340006 WTAPQ15007 396 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 CCDC178Q5BJE1 867 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
CSRP1-201ENST00000340006 ZKSCAN4Q969J2 545 aaPredicted RBP17.34■□□□□ 0.37
CSRP1-201ENST00000340006 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
CSRP1-201ENST00000340006 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.37
CSRP1-201ENST00000340006 IREB2P48200 963 aaKnown RBP17.33■□□□□ 0.37
CSRP1-201ENST00000340006 ANKRD1Q15327 319 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.37
CSRP1-201ENST00000340006 IGDCC4Q8TDY8 1250 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 KLRG1Q96E93 195 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 IL17RBQ9NRM6 502 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.37
CSRP1-201ENST00000340006 TNKSO95271 1327 aa17.33■□□□□ 0.37
CSRP1-201ENST00000340006 INPP5BP32019 993 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 AK2P54819 239 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 SEPT2Q15019 361 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
CSRP1-201ENST00000340006 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
CSRP1-201ENST00000340006 ARMC9Q7Z3E5 817 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 TMTC2Q8N394 836 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 IL27Q8NEV9 243 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 BRF1Q92994 677 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 CEP95Q96GE4 821 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 KANSL2Q9H9L4 492 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
CSRP1-201ENST00000340006 TCP11L1Q9NUJ3 509 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 WDR19Q8NEZ3 1342 aa17.33■□□□□ 0.36
CSRP1-201ENST00000340006 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 ASNSP08243 561 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 TTC14Q96N46 770 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms