RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 CALCOCO1Q9P1Z2 691 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
SEMA4D-201ENST00000339861 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 SOWAHDA6NJG2 315 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 ASIC1P78348 528 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 PLEKHA4Q9H4M7 779 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 MAN1B1Q9UKM7 699 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 CHMP4BP1P59074 171 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 SPA17Q15506 151 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 ZPR1O75312 459 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 ARID5AQ03989 594 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 SRRTQ9BXP5 876 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
SEMA4D-201ENST00000339861 COL15A1P39059 1388 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 MYO1BO43795 1136 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 GNAT2P19087 354 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 OAS2P29728 719 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 GRIN1Q05586 938 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 DDB1Q16531 1140 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 ZCCHC17Q9NP64 241 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 TAF3Q5VWG9 929 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 MROH7-TTC4A0A0A0MT08 1334 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 UTYO14607 1347 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 KIF20AO95235 890 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 KIF5BP33176 963 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 ALDH8A1Q9H2A2 487 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 CASP14P31944 242 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 PTGDRQ13258 359 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 CCDC96Q2M329 555 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 MMRN2Q9H8L6 949 aa12.54□□□□□ -0.4
SEMA4D-201ENST00000339861 CAPN2P17655 700 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 MTF1Q14872 753 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 TOGARAM2Q6ZUX3 1019 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 AKR1B10O60218 316 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 CHRNDQ07001 517 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 CCDC122Q5T0U0 273 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-201ENST00000339861 ENC1O14682 589 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 NAPAP54920 295 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 ZSCAN29Q8IWY8 852 aaPredicted RBP12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 DDX41Q9UJV9 622 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.4
SEMA4D-201ENST00000339861 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 RBL2Q08999 1139 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 DTHD1Q6ZMT9 781 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 VSTM4Q8IW00 320 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 TEX33O43247 280 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 PPP6R2O75170 966 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 MMP1P03956 469 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 PICALMQ13492 652 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 NELFBQ8WX92 580 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 RTL9Q8NET4 1388 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 RICTORQ6R327 1708 aa12.52□□□□□ -0.41
SEMA4D-201ENST00000339861 PSMA7O14818 248 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 LRRN4CLQ8ND94 238 aa12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-201ENST00000339861 IKBKBO14920 756 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms