RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DBNDD2Q9BQY9 259 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 WDR18Q9BV38 432 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 PRO3102Q9H379 93 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 DOCK3Q8IZD9 2030 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 FLT1P17948 1338 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 ATAD5Q96QE3 1844 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 DNAH12Q6ZR08 3092 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 MAST2Q6P0Q8 1798 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 BACE1P56817 501 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 PPP4CP60510 307 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 ADGRA1Q86SQ6 560 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 CRACR2BQ8N4Y2 399 aaPredicted RBP19.15■□□□□ 0.66
LINC01116-202ENST00000339037 TGFBRAP1Q8WUH2 860 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 PAWRQ96IZ0 340 aaKnown RBP19.15■□□□□ 0.66
LINC01116-202ENST00000339037 TRIM34Q9BYJ4 488 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 TMOD4Q9NZQ9 345 aa19.15■□□□□ 0.66
LINC01116-202ENST00000339037 CYP2E1P05181 493 aaPredicted RBP19.14■□□□□ 0.65
LINC01116-202ENST00000339037 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
LINC01116-202ENST00000339037 NECAB2Q7Z6G3 386 aa19.14■□□□□ 0.65
LINC01116-202ENST00000339037 DNAJC18Q9H819 358 aa19.14■□□□□ 0.65
LINC01116-202ENST00000339037 MORF4L1Q9UBU8 362 aa19.14■□□□□ 0.65
LINC01116-202ENST00000339037 GJD2Q9UKL4 321 aa19.14■□□□□ 0.65
LINC01116-202ENST00000339037 LAMA2P24043 3122 aaKnown RBP19.14■□□□□ 0.65
LINC01116-202ENST00000339037 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
LINC01116-202ENST00000339037 METTL16Q86W50 562 aaKnown RBP19.13■□□□□ 0.65
LINC01116-202ENST00000339037 FOXP4Q8IVH2 680 aaPredicted RBP19.13■□□□□ 0.65
LINC01116-202ENST00000339037 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
LINC01116-202ENST00000339037 PALD1Q9ULE6 856 aa19.13■□□□□ 0.65
LINC01116-202ENST00000339037 SIPA1L1O43166 1804 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 RPTORQ8N122 1335 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 A0A1W2PPC1 479 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 IGSF3O75054 1194 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 GDF11O95390 407 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
LINC01116-202ENST00000339037 HERVK_113P62684 666 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 JAG1P78504 1218 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
LINC01116-202ENST00000339037 ANKLE1Q8NAG6 615 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 DIS3LQ8TF46 1054 aaKnown RBP19.12■□□□□ 0.65
LINC01116-202ENST00000339037 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
LINC01116-202ENST00000339037 HMX1Q9NP08 348 aaPredicted RBP19.12■□□□□ 0.65
LINC01116-202ENST00000339037 GINM1Q9NU53 330 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 ZBTB21Q9ULJ3 1066 aa19.12■□□□□ 0.65
LINC01116-202ENST00000339037 C19orf81C9J6K1 198 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 USP17L10C9JJH3 530 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 HLA-DOAP06340 250 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 ZAP70P43403 619 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 SHROOM1Q2M3G4 852 aaPredicted RBP19.11■□□□□ 0.65
LINC01116-202ENST00000339037 GPRC5AQ8NFJ5 357 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 SOCS4Q8WXH5 440 aa19.11■□□□□ 0.65
LINC01116-202ENST00000339037 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
LINC01116-202ENST00000339037 SAP30BPQ9UHR5 308 aaKnown RBP19.11■□□□□ 0.65
LINC01116-202ENST00000339037 DBNLQ9UJU6 430 aaKnown RBP19.11■□□□□ 0.65
LINC01116-202ENST00000339037 ATP8B2P98198 1209 aa19.1■□□□□ 0.65
LINC01116-202ENST00000339037 TRIM32Q13049 653 aa19.1■□□□□ 0.65
LINC01116-202ENST00000339037 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
LINC01116-202ENST00000339037 TRIB2Q92519 343 aa19.1■□□□□ 0.65
LINC01116-202ENST00000339037 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
LINC01116-202ENST00000339037 TXNRD2Q9NNW7 524 aa19.1■□□□□ 0.65
LINC01116-202ENST00000339037 PIH1D3Q9NQM4 214 aaKnown RBP19.1■□□□□ 0.65
LINC01116-202ENST00000339037 ZBTB47Q9UFB7 747 aaPredicted RBP19.1■□□□□ 0.65
LINC01116-202ENST00000339037 CYP2B6P20813 491 aa19.09■□□□□ 0.65
LINC01116-202ENST00000339037 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
LINC01116-202ENST00000339037 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
LINC01116-202ENST00000339037 NBPF3Q9H094 633 aa19.09■□□□□ 0.65
LINC01116-202ENST00000339037 TLR7Q9NYK1 1049 aaKnown RBP19.09■□□□□ 0.65
LINC01116-202ENST00000339037 PEX10O60683 326 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 IDH1O75874 414 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 XRCC5P13010 732 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 PRKAR2AP13861 404 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 CYP7A1P22680 504 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 MAPK4P31152 587 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 DYNLL1P63167 89 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 PDE3AQ14432 1141 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 CERS3Q8IU89 383 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 CCAR1Q8IX12 1150 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 STAP2Q9UGK3 403 aa19.08■□□□□ 0.64
LINC01116-202ENST00000339037 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
LINC01116-202ENST00000339037 MYO5AQ9Y4I1 1855 aaKnown RBP19.07■□□□□ 0.64
LINC01116-202ENST00000339037 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 MAP3K21Q5TCX8 1036 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 ITPRIPQ8IWB1 547 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 C7orf61Q8IZ16 206 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 MIGA1Q8NAN2 632 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
LINC01116-202ENST00000339037 RBPJLQ9UBG7 517 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 CDK5RAP2Q96SN8 1893 aa19.07■□□□□ 0.64
LINC01116-202ENST00000339037 GH2P01242 217 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 ZKSCAN1P17029 563 aaPredicted RBP19.06■□□□□ 0.64
LINC01116-202ENST00000339037 ERVK-9P63128 1117 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 ERVK-24P63145 666 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 TRMT44Q8IYL2 757 aaKnown RBP19.06■□□□□ 0.64
LINC01116-202ENST00000339037 EAF2Q96CJ1 260 aaPredicted RBP19.06■□□□□ 0.64
LINC01116-202ENST00000339037 FEZ1Q99689 392 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 PAGR1Q9BTK6 254 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 EMILIN3Q9NT22 766 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 OGDHLQ9ULD0 1010 aa19.06■□□□□ 0.64
LINC01116-202ENST00000339037 PLXNB2O15031 1838 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms