RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TPH2Q8IWU9 490 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 RYBPQ8N488 228 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 FAM193BQ96PV7 902 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 RBSNQ9H1K0 784 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 TAF5LO75529 589 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 MAP7Q14244 749 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 EXOC7Q9UPT5 735 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 NUCB1Q02818 461 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 RSAD2Q8WXG1 361 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 SFMBT1Q9UHJ3 866 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 MX2P20592 715 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 INPP1P49441 399 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 CCDC141Q6ZP82 1450 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.326e-6■■■□□ 19.1
SHANK2-201ENST00000338508 EVCP57679 992 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 IGBP1P78318 339 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 FAM102BQ5T8I3 360 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
SHANK2-201ENST00000338508 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-201ENST00000338508 MGEA5O60502 916 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 EXOC3O60645 756 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 CXorf38Q8TB03 319 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 TACO1Q9BSH4 297 aaKnown RBP13.06□□□□□ -0.32
SHANK2-201ENST00000338508 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
SHANK2-201ENST00000338508 IL2RBP14784 551 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 VPS41P49754 854 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 MUM1L1Q5H9M0 696 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 HP1BP3Q5SSJ5 553 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 STAMQ92783 540 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 TIMM10P62072 90 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 Q3C1V9 767 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 ARFGAP2Q8N6H7 521 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 H0YIN7 160 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 KIF22Q14807 665 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 BAG2O95816 211 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 SLC1A4P43007 532 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 KAZNQ674X7 775 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 NCAPGQ9BPX3 1015 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 SPC25Q9HBM1 224 aa13.05□□□□□ -0.32
SHANK2-201ENST00000338508 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
SHANK2-201ENST00000338508 IFNB1P01574 187 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 CALCRLQ16602 461 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 GDAP1L1Q96MZ0 367 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 VCXQ9H320 206 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 HAUS3Q68CZ6 603 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 SUDS3Q9H7L9 328 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 NDUFAB1O14561 156 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 CDR2Q01850 454 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 KRT12Q99456 494 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 CYP2J2P51589 502 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 LCA5Q86VQ0 697 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 ABCB4P21439 1286 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 NME8Q8N427 588 aa13.04□□□□□ -0.32
SHANK2-201ENST00000338508 CPSF2Q9P2I0 782 aaKnown RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-201ENST00000338508 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
SHANK2-201ENST00000338508 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
SHANK2-201ENST00000338508 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
SHANK2-201ENST00000338508 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
SHANK2-201ENST00000338508 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
SHANK2-201ENST00000338508 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms