RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ZNF287Q9HBT7 754 aa18.88■□□□□ 0.61
MRPL55-202ENST00000336300 KCNH4Q9UQ05 1017 aa18.88■□□□□ 0.61
MRPL55-202ENST00000336300 AFG3L2Q9Y4W6 797 aa18.88■□□□□ 0.61
MRPL55-202ENST00000336300 GDF11O95390 407 aa18.87■□□□□ 0.61
MRPL55-202ENST00000336300 SLC3A2P08195 630 aaKnown RBP18.87■□□□□ 0.61
MRPL55-202ENST00000336300 CYP2D6P10635 497 aa18.87■□□□□ 0.61
MRPL55-202ENST00000336300 GABPAQ06546 454 aa18.87■□□□□ 0.61
MRPL55-202ENST00000336300 ABCB5Q2M3G0 1257 aa18.87■□□□□ 0.61
MRPL55-202ENST00000336300 CWC27Q6UX04 472 aaKnown RBP18.87■□□□□ 0.61
MRPL55-202ENST00000336300 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
MRPL55-202ENST00000336300 NAV1Q8NEY1 1877 aa18.87■□□□□ 0.61
MRPL55-202ENST00000336300 A0A0D9SFI3 127 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 MPHOSPH10O00566 681 aaKnown RBP18.86■□□□□ 0.61
MRPL55-202ENST00000336300 GSPT1P15170 499 aaKnown RBP18.86■□□□□ 0.61
MRPL55-202ENST00000336300 SHMT1P34896 483 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 CCDC129Q6ZRS4 1044 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 ZNF280CQ8ND82 737 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 ZBTB21Q9ULJ3 1066 aa18.86■□□□□ 0.61
MRPL55-202ENST00000336300 CYP2D7A0A087X1C5 515 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 GH2P01242 217 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 CDK8P49336 464 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 LBX1P52954 281 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 RRP1BQ14684 758 aaKnown RBP18.85■□□□□ 0.61
MRPL55-202ENST00000336300 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 C16orf86Q6ZW13 317 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 DYNLL2Q96FJ2 89 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 CCDC17Q96LX7 622 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
MRPL55-202ENST00000336300 ZCCHC17Q9NP64 241 aaKnown RBP18.85■□□□□ 0.61
MRPL55-202ENST00000336300 CCDC171Q6TFL3 1326 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 IGF2BP3O00425 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
MRPL55-202ENST00000336300 HSPA8P11142 646 aaKnown RBP18.84■□□□□ 0.61
MRPL55-202ENST00000336300 SPP2Q13103 211 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 PTPN18Q99952 460 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 WDR18Q9BV38 432 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
MRPL55-202ENST00000336300 PRDM10Q9NQV6 1147 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
MRPL55-202ENST00000336300 A0A0G2JLL6 359 aaPredicted RBP18.83■□□□□ 0.6
MRPL55-202ENST00000336300 TBC1D8O95759 1140 aa18.83■□□□□ 0.6
MRPL55-202ENST00000336300 PDE4BQ07343 736 aa18.83■□□□□ 0.6
MRPL55-202ENST00000336300 PRRT2Q7Z6L0 340 aaPredicted RBP18.83■□□□□ 0.6
MRPL55-202ENST00000336300 DOCK1Q14185 1865 aa18.83■□□□□ 0.6
MRPL55-202ENST00000336300 SIPA1L1O43166 1804 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 C19orf81C9J6K1 198 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 BTBD19C9JJ37 291 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
MRPL55-202ENST00000336300 ALX1Q15699 326 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 GADL1Q6ZQY3 521 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 ANKRD23Q86SG2 305 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 CCDC84Q86UT8 332 aaPredicted RBP18.82■□□□□ 0.6
MRPL55-202ENST00000336300 ZNF444Q8N0Y2 327 aaPredicted RBP18.82■□□□□ 0.6
MRPL55-202ENST00000336300 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 CFHR5Q9BXR6 569 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 ZFYVE28Q9HCC9 887 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 TMOD4Q9NZQ9 345 aa18.82■□□□□ 0.6
MRPL55-202ENST00000336300 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.82■□□□□ 0.6
MRPL55-202ENST00000336300 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
MRPL55-202ENST00000336300 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
MRPL55-202ENST00000336300 BACE1P56817 501 aa18.81■□□□□ 0.6
MRPL55-202ENST00000336300 EVX2Q03828 476 aa18.81■□□□□ 0.6
MRPL55-202ENST00000336300 PPARAQ07869 468 aa18.81■□□□□ 0.6
MRPL55-202ENST00000336300 TAF1CQ15572 869 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-202ENST00000336300 ZNF589Q86UQ0 364 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-202ENST00000336300 STK11IPQ8N1F8 1099 aa18.81■□□□□ 0.6
MRPL55-202ENST00000336300 FAM43AQ8N2R8 423 aa18.81■□□□□ 0.6
MRPL55-202ENST00000336300 PDHXO00330 501 aa18.8■□□□□ 0.6
MRPL55-202ENST00000336300 FGAP02671 866 aa18.8■□□□□ 0.6
MRPL55-202ENST00000336300 JAG1P78504 1218 aa18.8■□□□□ 0.6
MRPL55-202ENST00000336300 PABPC4Q13310 644 aaKnown RBP eCLIP18.8■□□□□ 0.64e-7■■■■□ 25.7
MRPL55-202ENST00000336300 VPS53Q5VIR6 699 aa18.8■□□□□ 0.6
MRPL55-202ENST00000336300 PROCA1Q8NCQ7 364 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-202ENST00000336300 FEZ1Q99689 392 aa18.8■□□□□ 0.6
MRPL55-202ENST00000336300 RAD50Q92878 1312 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 CHMLP26374 656 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 USP14P54578 494 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 HMGCS2P54868 508 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 CRHR2Q13324 411 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 MTMR2Q13614 643 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
MRPL55-202ENST00000336300 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 SH3D19Q5HYK7 790 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 ROBO3Q96MS0 1386 aa18.79■□□□□ 0.6
MRPL55-202ENST00000336300 ZMYM6O95789 1325 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 GPR25O00155 361 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 AKR1B1P15121 316 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 SEPT2Q15019 361 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
MRPL55-202ENST00000336300 USP17L2Q6R6M4 530 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
MRPL55-202ENST00000336300 SH2D4AQ9H788 454 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
MRPL55-202ENST00000336300 ARHGEF10LQ9HCE6 1279 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms