RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CYP2E1P05181 493 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-201ENST00000335508 PDIA3P30101 505 aaKnown RBP7.79□□□□□ -1.16
SF3B1-201ENST00000335508 USP14P54578 494 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 DIXDC1Q155Q3 683 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 TMEM179Q6ZVK1 233 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 NOSTRINQ8IVI9 506 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 CKAP2LQ8IYA6 745 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 MNS1Q8NEH6 495 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 SDR42E1Q8WUS8 393 aa7.79□□□□□ -1.16
SF3B1-201ENST00000335508 GOLGA6L9A6NEM1 432 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 POTEJP0CG39 1038 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ZNF397Q8NF99 534 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 NT5C3AQ9H0P0 336 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ZNRF3Q9ULT6 936 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 MRPL11Q9Y3B7 192 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 SAMM50Q9Y512 469 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 RPL13P26373 211 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ABCB5Q2M3G0 1257 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 KDM6AO15550 1401 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ADGRB2O60241 1585 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ENTPD3O75355 529 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 STAT6P42226 847 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ME3Q16798 604 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ARHGAP29Q52LW3 1261 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ODF2Q5BJF6 829 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 HHIPL2Q6UWX4 724 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 NSMFQ6X4W1 530 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ARHGAP27Q6ZUM4 889 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 FBXO33Q7Z6M2 555 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 KAZALD1Q96I82 304 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 NCOA5Q9HCD5 579 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 RABGAP1Q9Y3P9 1069 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ELP1O95163 1332 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 CCDC172P0C7W6 258 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 GYS1P13807 737 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 STYK1Q6J9G0 422 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 KLHL10Q6JEL2 608 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 PLCD3Q8N3E9 789 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 DCP1AQ9NPI6 582 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ARGLU1Q9NWB6 273 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 MTMR6Q9Y217 621 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ZSCAN12O43309 604 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ORC4O43929 436 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 CETN2P41208 172 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 PPP4CP60510 307 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 NOM1Q5C9Z4 860 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 LRSAM1Q6UWE0 723 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 MLKLQ8NB16 471 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 DEF6Q9H4E7 631 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 PIH1D3Q9NQM4 214 aaKnown RBP7.78□□□□□ -1.16
SF3B1-201ENST00000335508 LRWD1Q9UFC0 647 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 DESP17661 470 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 SLC5A4Q9NY91 659 aa7.78□□□□□ -1.16
SF3B1-201ENST00000335508 MROH2AA6NES4 1674 aa7.77□□□□□ -1.16
SF3B1-201ENST00000335508 FER1L4A9Z1Z3 1794 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 ASIC1P78348 528 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 CCNA1P78396 465 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 GNPTABQ3T906 1256 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 SYNE4Q8N205 404 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 TDRD7Q8NHU6 1098 aaKnown RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 ZKSCAN3Q9BRR0 538 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 PUS7LQ9H0K6 701 aaKnown RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 ALDH8A1Q9H2A2 487 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 N4BP3O15049 544 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 TTLL1O95922 423 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 FAM160B2Q86V87 743 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 TBC1D16Q8TBP0 767 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 IWS1Q96ST2 819 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 PANK2Q9BZ23 570 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 ZMYM6O95789 1325 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 BICDL2A1A5D9 508 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 LETM2Q2VYF4 491 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 SBK1Q52WX2 424 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 INTS5Q6P9B9 1019 aaKnown RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 MCF2L2Q86YR7 1114 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 RGS22Q8NE09 1264 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 LEO1Q8WVC0 666 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 DCPSQ96C86 337 aaKnown RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 CDHR1Q96JP9 859 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 EXOC1Q9NV70 894 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 KCNH3Q9ULD8 1083 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 PCDHA1Q9Y5I3 950 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 IQCA1LA6NCM1 817 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 ZNF589Q86UQ0 364 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 SPAG5Q96R06 1193 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 MTFR1LQ9H019 292 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 RPS12P25398 132 aaKnown RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 MECOMQ03112 1051 aa7.77□□□□□ -1.17
SF3B1-201ENST00000335508 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-201ENST00000335508 TCP10Q12799 353 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms