RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 TMOD4Q9NZQ9 345 aa31.69■■■□□ 2.66
RNF220-201ENST00000335497 C19orf81C9J6K1 198 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 INHAP05111 366 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 JAG1P78504 1218 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 AACSQ86V21 672 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 MAGEB6Q8N7X4 407 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 SAP30BPQ9UHR5 308 aaKnown RBP31.68■■■□□ 2.66
RNF220-201ENST00000335497 DOCK3Q8IZD9 2030 aa31.68■■■□□ 2.66
RNF220-201ENST00000335497 HOXA7P31268 230 aaPredicted RBP31.67■■■□□ 2.66
RNF220-201ENST00000335497 MAP3K12Q12852 859 aa31.67■■■□□ 2.66
RNF220-201ENST00000335497 SGPL1O95470 568 aa31.66■■■□□ 2.66
RNF220-201ENST00000335497 MORF4L1Q9UBU8 362 aa31.66■■■□□ 2.66
RNF220-201ENST00000335497 ZBTB21Q9ULJ3 1066 aa31.66■■■□□ 2.66
RNF220-201ENST00000335497 USP17L10C9JJH3 530 aa31.65■■■□□ 2.66
RNF220-201ENST00000335497 H0YGN5 161 aa31.65■■■□□ 2.66
RNF220-201ENST00000335497 IRX3P78415 501 aaPredicted RBP31.65■■■□□ 2.66
RNF220-201ENST00000335497 MIGA1Q8NAN2 632 aa31.65■■■□□ 2.66
RNF220-201ENST00000335497 ANTXR1Q9H6X2 564 aa31.65■■■□□ 2.66
RNF220-201ENST00000335497 NDUFB9Q9Y6M9 179 aa31.65■■■□□ 2.66
RNF220-201ENST00000335497 GDF11O95390 407 aa31.64■■■□□ 2.66
RNF220-201ENST00000335497 USP5P45974 858 aa31.64■■■□□ 2.66
RNF220-201ENST00000335497 HTATIP2Q9BUP3 242 aa31.64■■■□□ 2.66
RNF220-201ENST00000335497 SHROOM1Q2M3G4 852 aaPredicted RBP31.63■■■□□ 2.65
RNF220-201ENST00000335497 RHPN1Q8TCX5 695 aa31.63■■■□□ 2.65
RNF220-201ENST00000335497 DPF3Q92784 378 aa31.63■■■□□ 2.65
RNF220-201ENST00000335497 TAOK2Q9UL54 1235 aa31.63■■■□□ 2.65
RNF220-201ENST00000335497 COLQQ9Y215 455 aaPredicted RBP31.63■■■□□ 2.65
RNF220-201ENST00000335497 MYH1P12882 1939 aa31.63■■■□□ 2.65
RNF220-201ENST00000335497 CEP290O15078 2479 aa31.62■■■□□ 2.65
RNF220-201ENST00000335497 EHD4Q9H223 541 aa31.62■■■□□ 2.65
RNF220-201ENST00000335497 PAK6Q9NQU5 681 aaPredicted RBP31.62■■■□□ 2.65
RNF220-201ENST00000335497 GJD2Q9UKL4 321 aa31.62■■■□□ 2.65
RNF220-201ENST00000335497 FARP2O94887 1054 aaPredicted RBP31.61■■■□□ 2.65
RNF220-201ENST00000335497 TTF1Q15361 905 aaPredicted RBP31.61■■■□□ 2.65
RNF220-201ENST00000335497 TATDN1Q6P1N9 297 aa31.61■■■□□ 2.65
RNF220-201ENST00000335497 RPAP2Q8IXW5 612 aaPredicted RBP31.61■■■□□ 2.65
RNF220-201ENST00000335497 P2RX7Q99572 595 aaKnown RBP31.61■■■□□ 2.65
RNF220-201ENST00000335497 IL1RAPL2Q9NP60 686 aa31.61■■■□□ 2.65
RNF220-201ENST00000335497 SERPINB13Q9UIV8 391 aa31.61■■■□□ 2.65
RNF220-201ENST00000335497 DEFB118Q96PH6 123 aa31.6■■■□□ 2.65
RNF220-201ENST00000335497 HERVK_113P62684 666 aa31.59■■■□□ 2.65
RNF220-201ENST00000335497 TTC6Q86TZ1 520 aa31.59■■■□□ 2.65
RNF220-201ENST00000335497 KIF1BPQ96EK5 621 aa31.59■■■□□ 2.65
RNF220-201ENST00000335497 HMMRO75330 724 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 GH2P01242 217 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 TFRCP02786 760 aaKnown RBP31.58■■■□□ 2.65
RNF220-201ENST00000335497 HMGCRP04035 888 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 USP17L2Q6R6M4 530 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 CLASRPQ8N2M8 674 aaKnown RBP31.58■■■□□ 2.65
RNF220-201ENST00000335497 GPRC5AQ8NFJ5 357 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.58■■■□□ 2.65
RNF220-201ENST00000335497 RIOK1Q9BRS2 568 aaKnown RBP31.58■■■□□ 2.65
RNF220-201ENST00000335497 CRISPLD2Q9H0B8 497 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 DDX19BQ9UMR2 479 aa31.58■■■□□ 2.65
RNF220-201ENST00000335497 GTF3C2Q8WUA4 911 aaPredicted RBP31.57■■■□□ 2.64
RNF220-201ENST00000335497 EMILIN3Q9NT22 766 aa31.57■■■□□ 2.64
RNF220-201ENST00000335497 FXR1P51114 621 aaKnown RBP eCLIP31.56■■■□□ 2.64
RNF220-201ENST00000335497 TXNRD2Q9NNW7 524 aa31.56■■■□□ 2.64
RNF220-201ENST00000335497 ZBTB40Q9NUA8 1239 aa31.56■■■□□ 2.64
RNF220-201ENST00000335497 C12orf42Q96LP6 360 aa31.55■■■□□ 2.64
RNF220-201ENST00000335497 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.55■■■□□ 2.645e-6■■□□□ 13.9
RNF220-201ENST00000335497 RBPJLQ9UBG7 517 aa31.55■■■□□ 2.64
RNF220-201ENST00000335497 NR2E3Q9Y5X4 410 aa31.55■■■□□ 2.64
RNF220-201ENST00000335497 MAGEB6P1A0A0J9YX57 407 aa31.54■■■□□ 2.64
RNF220-201ENST00000335497 PLXNB2O15031 1838 aa31.54■■■□□ 2.64
RNF220-201ENST00000335497 PDE6AP16499 860 aa31.53■■■□□ 2.64
RNF220-201ENST00000335497 CERKLQ49MI3 558 aaPredicted RBP31.53■■■□□ 2.64
RNF220-201ENST00000335497 SLC9C2Q5TAH2 1124 aa31.53■■■□□ 2.64
RNF220-201ENST00000335497 SIRT2Q8IXJ6 389 aa31.53■■■□□ 2.64
RNF220-201ENST00000335497 SOCS4Q8WXH5 440 aa31.53■■■□□ 2.64
RNF220-201ENST00000335497 CHMP4BQ9H444 224 aaKnown RBP31.53■■■□□ 2.64
RNF220-201ENST00000335497 COG6Q9Y2V7 657 aa31.53■■■□□ 2.64
RNF220-201ENST00000335497 RPTORQ8N122 1335 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 RAB11FIP3O75154 756 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 IFIT2P09913 472 aaKnown RBP31.52■■■□□ 2.64
RNF220-201ENST00000335497 MAPK4P31152 587 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 ERVK-9P63128 1117 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 ERVK-24P63145 666 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 ABCB5Q2M3G0 1257 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 FEZ1Q99689 392 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 NUDT12Q9BQG2 462 aa31.52■■■□□ 2.64
RNF220-201ENST00000335497 CRNKL1Q9BZJ0 848 aaKnown RBP31.52■■■□□ 2.64
RNF220-201ENST00000335497 XRCC5P13010 732 aaKnown RBP31.51■■■□□ 2.63
RNF220-201ENST00000335497 PLCD1P51178 756 aa31.51■■■□□ 2.63
RNF220-201ENST00000335497 USP14P54578 494 aa31.51■■■□□ 2.63
RNF220-201ENST00000335497 KIAA1683Q9H0B3 1180 aa31.51■■■□□ 2.63
RNF220-201ENST00000335497 HMX1Q9NP08 348 aaPredicted RBP31.51■■■□□ 2.63
RNF220-201ENST00000335497 CABP5Q9NP86 173 aa31.51■■■□□ 2.63
RNF220-201ENST00000335497 DDX60LQ5H9U9 1706 aaKnown RBP31.5■■■□□ 2.63
RNF220-201ENST00000335497 APBB1O00213 710 aa31.5■■■□□ 2.63
RNF220-201ENST00000335497 PEX10O60683 326 aa31.5■■■□□ 2.63
RNF220-201ENST00000335497 POLR3DP05423 398 aaPredicted RBP31.5■■■□□ 2.63
RNF220-201ENST00000335497 RAB3GAP1Q15042 981 aa31.5■■■□□ 2.63
RNF220-201ENST00000335497 CHRDL2Q6WN34 429 aa31.5■■■□□ 2.63
RNF220-201ENST00000335497 USP17L15C9J2P7 530 aa31.49■■■□□ 2.63
RNF220-201ENST00000335497 USP17L13C9JLJ4 530 aa31.49■■■□□ 2.63
RNF220-201ENST00000335497 USP17L11C9JVI0 530 aa31.49■■■□□ 2.63
RNF220-201ENST00000335497 USP17L18D6R9N7 530 aa31.49■■■□□ 2.63
RNF220-201ENST00000335497 USP17L22D6RA61 530 aa31.49■■■□□ 2.63
RNF220-201ENST00000335497 USP17L17D6RBQ6 530 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms