RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.85
LRCH3-201ENST00000334859 HSD3B7Q9H2F3 369 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 CABP5Q9NP86 173 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 SERPINC1P01008 464 aa20.33■□□□□ 0.84
LRCH3-201ENST00000334859 XBP1P17861 261 aa20.33■□□□□ 0.84
LRCH3-201ENST00000334859 PTPREP23469 700 aa20.33■□□□□ 0.84
LRCH3-201ENST00000334859 IQCA1Q86XH1 822 aa20.33■□□□□ 0.84
LRCH3-201ENST00000334859 VPS54Q9P1Q0 977 aa20.33■□□□□ 0.84
LRCH3-201ENST00000334859 hCG_1642624A0A1W2PR95 340 aa20.32■□□□□ 0.84
LRCH3-201ENST00000334859 POLR2DO15514 142 aaKnown RBP20.32■□□□□ 0.84
LRCH3-201ENST00000334859 NYAP1Q6ZVC0 841 aa20.32■□□□□ 0.84
LRCH3-201ENST00000334859 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
LRCH3-201ENST00000334859 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
LRCH3-201ENST00000334859 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
LRCH3-201ENST00000334859 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
LRCH3-201ENST00000334859 NRDCO43847 1150 aa20.31■□□□□ 0.84
LRCH3-201ENST00000334859 UBASH3AP57075 661 aa20.31■□□□□ 0.84
LRCH3-201ENST00000334859 POSTNQ15063 836 aa20.31■□□□□ 0.84
LRCH3-201ENST00000334859 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
LRCH3-201ENST00000334859 PDILTQ8N807 584 aa20.31■□□□□ 0.84
LRCH3-201ENST00000334859 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 FAM205CA6NFA0 338 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 USP17L12C9JPN9 530 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 USP17L21D6R901 530 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 CBFA2T2O43439 604 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 CTR9Q6PD62 1173 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 SERTAD1Q9UHV2 236 aa20.3■□□□□ 0.84
LRCH3-201ENST00000334859 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 MECOMQ03112 1051 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 DPF2Q92785 391 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 SHISA4Q96DD7 197 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 FANCLQ9NW38 375 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 AATFQ9NY61 560 aaKnown RBP eCLIP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 SRP68Q9UHB9 627 aaKnown RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 SRPRBQ9Y5M8 271 aaKnown RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 CNTNAP4Q9C0A0 1308 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 TRIM75PA6NK02 468 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 SEMA3EO15041 775 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 PRR29P0C7W0 189 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 BMP6P22004 513 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 KRT2P35908 639 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 MDM2Q00987 491 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 PDE4BQ07343 736 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 DHX8Q14562 1220 aaKnown RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 FBXO33Q7Z6M2 555 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 GRAMD1CQ8IYS0 662 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 PDCL2Q8N4E4 241 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 NSUN4Q96CB9 384 aaKnown RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 MAN1B1Q9UKM7 699 aa20.29■□□□□ 0.84
LRCH3-201ENST00000334859 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-201ENST00000334859 NCBP1Q09161 790 aaKnown RBP20.28■□□□□ 0.84
LRCH3-201ENST00000334859 PKN1Q16512 942 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 ZNF579Q8NAF0 562 aaKnown RBP20.28■□□□□ 0.84
LRCH3-201ENST00000334859 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 NLRP3Q96P20 1036 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 CSRNP2Q9H175 543 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
LRCH3-201ENST00000334859 HIBADHP31937 336 aaKnown RBP20.28■□□□□ 0.84
LRCH3-201ENST00000334859 EVX2Q03828 476 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 ZNF827Q17R98 1081 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 HSP90AA4PQ58FG1 418 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 ANKRD7Q92527 254 aa20.28■□□□□ 0.84
LRCH3-201ENST00000334859 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
LRCH3-201ENST00000334859 ZNF831Q5JPB2 1677 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 CALM1P0DP23 149 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 CALM2P0DP24 149 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 CALM3P0DP25 149 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 PCP11498 1178 aaKnown RBP20.27■□□□□ 0.84
LRCH3-201ENST00000334859 PIP4K2BP78356 416 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 FUT2Q10981 343 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 TROAPQ12815 778 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 E4F1Q66K89 784 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-201ENST00000334859 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 ELOA2Q8IYF1 753 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-201ENST00000334859 PHF20Q9BVI0 1012 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-201ENST00000334859 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
LRCH3-201ENST00000334859 PRPF3O43395 683 aaKnown RBP20.27■□□□□ 0.83
LRCH3-201ENST00000334859 PRDX5P30044 214 aa20.27■□□□□ 0.83
LRCH3-201ENST00000334859 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.83
LRCH3-201ENST00000334859 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.83
LRCH3-201ENST00000334859 KCND1Q9NSA2 647 aa20.27■□□□□ 0.83
LRCH3-201ENST00000334859 GNPATO15228 680 aa20.26■□□□□ 0.83
LRCH3-201ENST00000334859 NMT2O60551 498 aa20.26■□□□□ 0.83
LRCH3-201ENST00000334859 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
LRCH3-201ENST00000334859 PPP1R13BQ96KQ4 1090 aa20.26■□□□□ 0.83
LRCH3-201ENST00000334859 ZPR1O75312 459 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 DDAH1O94760 285 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 PTPN21Q16825 1174 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 EARS2Q5JPH6 523 aaKnown RBP20.25■□□□□ 0.83
LRCH3-201ENST00000334859 FAM47AQ5JRC9 791 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 PPP4R3BQ5MIZ7 849 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms