RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
C9orf85-201ENST00000334731 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 EDC3Q96F86 508 aaKnown RBP13.61□□□□□ -0.23
C9orf85-201ENST00000334731 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 WDR18Q9BV38 432 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 BOLA2Q9H3K6 86 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 ZNF532Q9HCE3 1301 aa13.61□□□□□ -0.23
C9orf85-201ENST00000334731 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 SMARCA5O60264 1052 aaPredicted RBP13.6□□□□□ -0.23
C9orf85-201ENST00000334731 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
C9orf85-201ENST00000334731 ASNSP08243 561 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 PRMT2P55345 433 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 SLC9C1Q4G0N8 1177 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 SH3D19Q5HYK7 790 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 GINM1Q9NU53 330 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 SRRDQ9UH36 339 aa13.6□□□□□ -0.23
C9orf85-201ENST00000334731 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 GDF11O95390 407 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 OSBPP22059 807 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 HOXD10P28358 340 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 PLCD1P51178 756 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 FCGRTP55899 365 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 BACE1P56817 501 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
C9orf85-201ENST00000334731 HAUS7Q99871 368 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 EHD4Q9H223 541 aa13.59□□□□□ -0.23
C9orf85-201ENST00000334731 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
C9orf85-201ENST00000334731 SH3TC2Q8TF17 1288 aa13.58□□□□□ -0.24
C9orf85-201ENST00000334731 CRNKL1Q9BZJ0 848 aaKnown RBP13.58□□□□□ -0.24
C9orf85-201ENST00000334731 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
C9orf85-201ENST00000334731 ZBTB21Q9ULJ3 1066 aa13.58□□□□□ -0.24
C9orf85-201ENST00000334731 DOCK1Q14185 1865 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 GH2P01242 217 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
C9orf85-201ENST00000334731 ADD2P35612 726 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 PRKCZQ05513 592 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 PABPC4Q13310 644 aaKnown RBP eCLIP13.57□□□□□ -0.24
C9orf85-201ENST00000334731 MTMR2Q13614 643 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 ASCC2Q9H1I8 757 aaPredicted RBP13.57□□□□□ -0.24
C9orf85-201ENST00000334731 PNMA3Q9UL41 463 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 HTTP42858 3142 aa13.57□□□□□ -0.24
C9orf85-201ENST00000334731 MYO5AQ9Y4I1 1855 aaKnown RBP13.57□□□□□ -0.24
C9orf85-201ENST00000334731 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 CHGBP05060 677 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 GABPAQ06546 454 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 DCP1AQ9NPI6 582 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-201ENST00000334731 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 TMOD4Q9NZQ9 345 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 GABRQQ9UN88 632 aa13.56□□□□□ -0.24
C9orf85-201ENST00000334731 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 PRKAB2O43741 272 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 GRK4P32298 578 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 SHMT1P34896 483 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 GCLCP48506 637 aaPredicted RBP13.55□□□□□ -0.24
C9orf85-201ENST00000334731 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
C9orf85-201ENST00000334731 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 FAM110CQ1W6H9 321 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 P2RX7Q99572 595 aaKnown RBP13.55□□□□□ -0.24
C9orf85-201ENST00000334731 EMILIN3Q9NT22 766 aa13.55□□□□□ -0.24
C9orf85-201ENST00000334731 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
C9orf85-201ENST00000334731 MBD4O95243 580 aa13.54□□□□□ -0.24
C9orf85-201ENST00000334731 FLT3LGP49771 235 aa13.54□□□□□ -0.24
C9orf85-201ENST00000334731 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
C9orf85-201ENST00000334731 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
C9orf85-201ENST00000334731 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
C9orf85-201ENST00000334731 ZSWIM8A7E2V4 1837 aa13.54□□□□□ -0.24
C9orf85-201ENST00000334731 CYP2D6P10635 497 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 GUCY1A2P33402 732 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 IRX3P78415 501 aaPredicted RBP13.53□□□□□ -0.24
C9orf85-201ENST00000334731 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 MTFR1Q15390 333 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 ZSCAN25Q6NSZ9 544 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms