RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 FAM114A2Q9NRY5 505 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 CLGNO14967 610 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 KRT81Q14533 505 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 ZNF365Q70YC5 407 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 GPR161Q8N6U8 529 aaKnown RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 CCDC26Q8TAB7 109 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 VAV2P52735 878 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 KIF22Q14807 665 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 SCYL1Q96KG9 808 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 FAM193BQ96PV7 902 aaPredicted RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 A1BGP04217 495 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 NIM1KQ8IY84 436 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 BAG1Q99933 345 aaPredicted RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 DENND2AQ9ULE3 1009 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 KCNJ14Q9UNX9 436 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.537e-9■■■■■ 47.1
CLN8-201ENST00000331222 VPS41P49754 854 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 DNM2P50570 870 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 METTL14Q9HCE5 456 aaKnown RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 CAPN9O14815 690 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 POMGNT1Q8WZA1 660 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 NUF2Q9BZD4 464 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.75□□□□□ -0.53
CLN8-201ENST00000331222 UBN2Q6ZU65 1347 aa11.75□□□□□ -0.53
CLN8-201ENST00000331222 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 GDAP1L1Q96MZ0 367 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 SLC12A1Q13621 1099 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 COBLO75128 1261 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 ATP11AP98196 1134 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 NEDD9Q14511 834 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 OLA1Q9NTK5 396 aaKnown RBP11.74□□□□□ -0.53
CLN8-201ENST00000331222 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
CLN8-201ENST00000331222 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
CLN8-201ENST00000331222 ABCB4P21439 1286 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 TNNC1P63316 161 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 RPS6KA2Q15349 733 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 H7C1D1 291 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 WDR46O15213 610 aaKnown RBP11.74□□□□□ -0.53
CLN8-201ENST00000331222 GTF2IP78347 998 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 SEPT6Q14141 434 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
CLN8-201ENST00000331222 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 SUGCTQ9HAC7 445 aa11.74□□□□□ -0.53
CLN8-201ENST00000331222 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
CLN8-201ENST00000331222 FYB2Q5VWT5 728 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 THRAP3Q9Y2W1 955 aaKnown RBP11.73□□□□□ -0.53
CLN8-201ENST00000331222 SLC12A2P55011 1212 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 ARPP19P56211 112 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 UBL4BQ8N7F7 174 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 SMYD2Q9NRG4 433 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
CLN8-201ENST00000331222 CNNM4Q6P4Q7 775 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 CSADQ9Y600 493 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 PLCH2O75038 1416 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 EXOC3O60645 756 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
CLN8-201ENST00000331222 MIPOL1Q8TD10 442 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 DNM3Q9UQ16 869 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
CLN8-201ENST00000331222 PCK1P35558 622 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 SPAG1Q07617 926 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 TTC31Q49AM3 519 aaPredicted RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 ALAS1P13196 640 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 ANKRD42Q8N9B4 389 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 RNF217Q8TC41 542 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLN8-201ENST00000331222 CEP104O60308 925 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
CLN8-201ENST00000331222 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
CLN8-201ENST00000331222 RSAD2Q8WXG1 361 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms