RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 EP400NLQ6ZTU2 488 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 RAPGEF4Q8WZA2 1011 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 ZNF496Q96IT1 587 aaPredicted RBP27.5■■□□□ 1.99
SOX1-201ENST00000330949 CTAGE1Q96RT6 745 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 SARSP49591 514 aaKnown RBP27.5■■□□□ 1.99
SOX1-201ENST00000330949 GOLGA6BA6NDN3 693 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 NEURL1BA8MQ27 555 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 BRD2P25440 801 aaKnown RBP27.49■■□□□ 1.99
SOX1-201ENST00000330949 CASP14P31944 242 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 ARHGAP25P42331 645 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 FILIP1LQ4L180 1135 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 GIMAP7Q8NHV1 300 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 A6NNZ2 444 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 AGPSO00116 658 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 C21orf2O43822 256 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 SF3B2Q13435 895 aaKnown RBP27.49■■□□□ 1.99
SOX1-201ENST00000330949 CHRNA2Q15822 529 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 TUBB8Q3ZCM7 444 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 SLC9C2Q5TAH2 1124 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 B4GALNT4Q76KP1 1039 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 TRAPPC11Q7Z392 1133 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 CAPN7Q9Y6W3 813 aa27.49■■□□□ 1.99
SOX1-201ENST00000330949 H0YHG0 523 aa27.48■■□□□ 1.99
SOX1-201ENST00000330949 NBPF14Q5TI25 921 aa27.48■■□□□ 1.99
SOX1-201ENST00000330949 APTXQ7Z2E3 356 aaKnown RBP27.48■■□□□ 1.99
SOX1-201ENST00000330949 KRI1Q8N9T8 703 aaKnown RBP27.48■■□□□ 1.99
SOX1-201ENST00000330949 JPH2Q9BR39 696 aaPredicted RBP27.48■■□□□ 1.99
SOX1-201ENST00000330949 GNL3LQ9NVN8 582 aaKnown RBP27.48■■□□□ 1.99
SOX1-201ENST00000330949 SPATS2Q86XZ4 545 aaKnown RBP27.48■■□□□ 1.99
SOX1-201ENST00000330949 MED15Q96RN5 788 aa27.48■■□□□ 1.99
SOX1-201ENST00000330949 SELENOOQ9BVL4 669 aa27.48■■□□□ 1.99
SOX1-201ENST00000330949 GCKRQ14397 625 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 ZNF827Q17R98 1081 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 ALG1Q9BT22 464 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 PAG1Q9NWQ8 432 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 ADD3Q9UEY8 706 aaKnown RBP27.47■■□□□ 1.99
SOX1-201ENST00000330949 USP54Q70EL1 1684 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 PRC1O43663 620 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 KIAA0754O94854 1291 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 ABL1P00519 1130 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 GPTP24298 496 aa27.47■■□□□ 1.99
SOX1-201ENST00000330949 GRIN2DO15399 1336 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 GNGT1P63211 74 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 SATB1Q01826 763 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 ITIH6Q6UXX5 1313 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 MYH8P13535 1937 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 GOLIM4O00461 696 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 CYP26C1Q6V0L0 522 aa27.46■■□□□ 1.99
SOX1-201ENST00000330949 KRT40Q6A162 431 aa27.45■■□□□ 1.99
SOX1-201ENST00000330949 AMOTL1Q8IY63 956 aa27.45■■□□□ 1.99
SOX1-201ENST00000330949 FSBPO95073 299 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 GYPCP04921 128 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 RDXP35241 583 aaKnown RBP27.45■■□□□ 1.98
SOX1-201ENST00000330949 CKAP4Q07065 602 aaKnown RBP27.45■■□□□ 1.98
SOX1-201ENST00000330949 NEDD9Q14511 834 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 SPATA1Q5VX52 437 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 HEG1Q9ULI3 1381 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 MAST3O60307 1309 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 PTPN12Q05209 780 aaKnown RBP27.45■■□□□ 1.98
SOX1-201ENST00000330949 KANK3Q6NY19 840 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 ANKRD13DQ6ZTN6 518 aa27.45■■□□□ 1.98
SOX1-201ENST00000330949 GOLGA8KD6RF30 607 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 PSMD14O00487 310 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 CDKL5O76039 1030 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 FXR1P51114 621 aaKnown RBP eCLIP27.44■■□□□ 1.98
SOX1-201ENST00000330949 OTUD6BQ8N6M0 293 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 GDAP1L1Q96MZ0 367 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 NEUROD6Q96NK8 337 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 TAOK2Q9UL54 1235 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 SAR1BQ9Y6B6 198 aa27.44■■□□□ 1.98
SOX1-201ENST00000330949 ZMYM6O95789 1325 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 IMMTQ16891 758 aaKnown RBP27.43■■□□□ 1.98
SOX1-201ENST00000330949 SH3GL2Q99962 352 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 CARD10Q9BWT7 1032 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 SEMA3EO15041 775 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 CHUKO15111 745 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 FNTAP49354 379 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 ERVK-24P63145 666 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 CCNI2Q6ZMN8 369 aaPredicted RBP27.43■■□□□ 1.98
SOX1-201ENST00000330949 XAGE2Q96GT9 111 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 MMS19Q96T76 1030 aa27.43■■□□□ 1.98
SOX1-201ENST00000330949 RFX5P48382 616 aaPredicted RBP27.42■■□□□ 1.98
SOX1-201ENST00000330949 PROSER2Q86WR7 435 aaPredicted RBP27.42■■□□□ 1.98
SOX1-201ENST00000330949 RAB11FIP4Q86YS3 637 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 POLR2DO15514 142 aaKnown RBP27.42■■□□□ 1.98
SOX1-201ENST00000330949 TTC5Q8N0Z6 440 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 EHD4Q9H223 541 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 SLC52A2Q9HAB3 445 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 ABHD10Q9NUJ1 306 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 SERTAD1Q9UHV2 236 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 OVOS2A0A0G2JMS6 1433 aa27.42■■□□□ 1.98
SOX1-201ENST00000330949 A0A087WZG4 1122 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 MB21D2Q8IYB1 491 aaPredicted RBP27.41■■□□□ 1.98
SOX1-201ENST00000330949 NBPF3Q9H094 633 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 LMO7Q8WWI1 1683 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 AIFM3Q96NN9 605 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 FAM184BQ9ULE4 1060 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 SYNRGQ9UMZ2 1314 aa27.41■■□□□ 1.98
SOX1-201ENST00000330949 C4AP0C0L4 1744 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms