RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 CCAR1Q8IX12 1150 aaKnown RBP28.42■■■□□ 2.14
TMEM54-201ENST00000329151 COLQQ9Y215 455 aaPredicted RBP28.42■■■□□ 2.14
TMEM54-201ENST00000329151 SIPA1L1O43166 1804 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 C19orf81C9J6K1 198 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 GDF11O95390 407 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 MS4A1P11836 297 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 RRP1BQ14684 758 aaKnown RBP28.41■■■□□ 2.14
TMEM54-201ENST00000329151 HSP90AB4PQ58FF6 505 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 ADGRA1Q86SQ6 560 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 MIER1Q8N108 512 aa28.41■■■□□ 2.14
TMEM54-201ENST00000329151 TLR7Q9NYK1 1049 aaKnown RBP28.41■■■□□ 2.14
TMEM54-201ENST00000329151 USP17L10C9JJH3 530 aa28.4■■■□□ 2.14
TMEM54-201ENST00000329151 RLBP1P12271 317 aa28.4■■■□□ 2.14
TMEM54-201ENST00000329151 DYNLL1P63167 89 aaKnown RBP28.4■■■□□ 2.14
TMEM54-201ENST00000329151 AACSQ86V21 672 aa28.4■■■□□ 2.14
TMEM54-201ENST00000329151 MAGEB6Q8N7X4 407 aa28.4■■■□□ 2.14
TMEM54-201ENST00000329151 EAF2Q96CJ1 260 aaPredicted RBP28.4■■■□□ 2.14
TMEM54-201ENST00000329151 DEFB118Q96PH6 123 aa28.4■■■□□ 2.14
TMEM54-201ENST00000329151 MIGA1Q8NAN2 632 aa28.39■■■□□ 2.14
TMEM54-201ENST00000329151 ZBTB21Q9ULJ3 1066 aa28.39■■■□□ 2.14
TMEM54-201ENST00000329151 EXOC6BQ9Y2D4 811 aa28.39■■■□□ 2.14
TMEM54-201ENST00000329151 CEP85Q6P2H3 762 aa28.38■■■□□ 2.13
TMEM54-201ENST00000329151 CWC22Q9HCG8 908 aaKnown RBP28.38■■■□□ 2.13
TMEM54-201ENST00000329151 TMED8Q6PL24 325 aaPredicted RBP28.37■■■□□ 2.13
TMEM54-201ENST00000329151 FEZ1Q99689 392 aa28.37■■■□□ 2.13
TMEM54-201ENST00000329151 HMGCRP04035 888 aa28.36■■■□□ 2.13
TMEM54-201ENST00000329151 PDE3AQ14432 1141 aa28.36■■■□□ 2.13
TMEM54-201ENST00000329151 CHRDL2Q6WN34 429 aa28.36■■■□□ 2.13
TMEM54-201ENST00000329151 TTC6Q86TZ1 520 aa28.35■■■□□ 2.13
TMEM54-201ENST00000329151 METTL16Q86W50 562 aaKnown RBP28.35■■■□□ 2.13
TMEM54-201ENST00000329151 GPRC5AQ8NFJ5 357 aa28.35■■■□□ 2.13
TMEM54-201ENST00000329151 PANK1Q8TE04 598 aa28.35■■■□□ 2.13
TMEM54-201ENST00000329151 GTF3C2Q8WUA4 911 aaPredicted RBP28.35■■■□□ 2.13
TMEM54-201ENST00000329151 DNAJC18Q9H819 358 aa28.35■■■□□ 2.13
TMEM54-201ENST00000329151 ZBED9Q6R2W3 1325 aa28.35■■■□□ 2.13
TMEM54-201ENST00000329151 HOXA7P31268 230 aaPredicted RBP28.34■■■□□ 2.13
TMEM54-201ENST00000329151 HERVK_113P62684 666 aa28.34■■■□□ 2.13
TMEM54-201ENST00000329151 TTF1Q15361 905 aaPredicted RBP28.34■■■□□ 2.13
TMEM54-201ENST00000329151 USP17L2Q6R6M4 530 aa28.34■■■□□ 2.13
TMEM54-201ENST00000329151 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.34■■■□□ 2.13
TMEM54-201ENST00000329151 BCL11AQ9H165 835 aa28.34■■■□□ 2.13
TMEM54-201ENST00000329151 MORF4L1Q9UBU8 362 aa28.34■■■□□ 2.13
TMEM54-201ENST00000329151 SERPINB13Q9UIV8 391 aa28.34■■■□□ 2.13
TMEM54-201ENST00000329151 EVI5O60447 810 aa28.33■■■□□ 2.13
TMEM54-201ENST00000329151 HMMRO75330 724 aa28.33■■■□□ 2.13
TMEM54-201ENST00000329151 P2RX7Q99572 595 aaKnown RBP28.33■■■□□ 2.13
TMEM54-201ENST00000329151 NDUFB9Q9Y6M9 179 aa28.33■■■□□ 2.13
TMEM54-201ENST00000329151 GH2P01242 217 aa28.32■■■□□ 2.12
TMEM54-201ENST00000329151 FXR1P51114 621 aaKnown RBP eCLIP28.32■■■□□ 2.12
TMEM54-201ENST00000329151 UBE2Q1Q7Z7E8 422 aa28.32■■■□□ 2.12
TMEM54-201ENST00000329151 CLASRPQ8N2M8 674 aaKnown RBP28.32■■■□□ 2.12
TMEM54-201ENST00000329151 NUDT12Q9BQG2 462 aa28.32■■■□□ 2.12
TMEM54-201ENST00000329151 PAGR1Q9BTK6 254 aa28.32■■■□□ 2.12
TMEM54-201ENST00000329151 HMX1Q9NP08 348 aaPredicted RBP28.32■■■□□ 2.12
TMEM54-201ENST00000329151 CABP5Q9NP86 173 aa28.32■■■□□ 2.12
TMEM54-201ENST00000329151 PAK6Q9NQU5 681 aaPredicted RBP28.32■■■□□ 2.12
TMEM54-201ENST00000329151 APBB1O00213 710 aa28.31■■■□□ 2.12
TMEM54-201ENST00000329151 RAB3GAP1Q15042 981 aa28.31■■■□□ 2.12
TMEM54-201ENST00000329151 SOCS4Q8WXH5 440 aa28.31■■■□□ 2.12
TMEM54-201ENST00000329151 IL1RAPL2Q9NP60 686 aa28.31■■■□□ 2.12
TMEM54-201ENST00000329151 POLR3DP05423 398 aaPredicted RBP28.3■■■□□ 2.12
TMEM54-201ENST00000329151 IFIT2P09913 472 aaKnown RBP28.3■■■□□ 2.12
TMEM54-201ENST00000329151 CYP2B6P20813 491 aa28.3■■■□□ 2.12
TMEM54-201ENST00000329151 MAPK4P31152 587 aa28.3■■■□□ 2.12
TMEM54-201ENST00000329151 USP14P54578 494 aa28.3■■■□□ 2.12
TMEM54-201ENST00000329151 CERKLQ49MI3 558 aaPredicted RBP28.3■■■□□ 2.12
TMEM54-201ENST00000329151 NECAB2Q7Z6G3 386 aa28.3■■■□□ 2.12
TMEM54-201ENST00000329151 RPTORQ8N122 1335 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 MAGEB6P1A0A0J9YX57 407 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 JAG1P78504 1218 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 ZYXQ15942 572 aaKnown RBP28.29■■■□□ 2.12
TMEM54-201ENST00000329151 SHROOM1Q2M3G4 852 aaPredicted RBP28.29■■■□□ 2.12
TMEM54-201ENST00000329151 RHPN1Q8TCX5 695 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 CRNKL1Q9BZJ0 848 aaKnown RBP28.29■■■□□ 2.12
TMEM54-201ENST00000329151 EHD4Q9H223 541 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 CHMP4BQ9H444 224 aaKnown RBP28.29■■■□□ 2.12
TMEM54-201ENST00000329151 ANTXR1Q9H6X2 564 aa28.29■■■□□ 2.12
TMEM54-201ENST00000329151 NAV1Q8NEY1 1877 aa28.28■■■□□ 2.12
TMEM54-201ENST00000329151 ABCB5Q2M3G0 1257 aa28.28■■■□□ 2.12
TMEM54-201ENST00000329151 TRMT44Q8IYL2 757 aaKnown RBP28.28■■■□□ 2.12
TMEM54-201ENST00000329151 KIF1BPQ96EK5 621 aa28.28■■■□□ 2.12
TMEM54-201ENST00000329151 GJD2Q9UKL4 321 aa28.28■■■□□ 2.12
TMEM54-201ENST00000329151 ERVK-9P63128 1117 aa28.27■■■□□ 2.12
TMEM54-201ENST00000329151 ERVK-24P63145 666 aa28.27■■■□□ 2.12
TMEM54-201ENST00000329151 ANKLE1Q8NAG6 615 aa28.27■■■□□ 2.12
TMEM54-201ENST00000329151 PAWRQ96IZ0 340 aaKnown RBP28.27■■■□□ 2.12
TMEM54-201ENST00000329151 DNAJC2Q99543 621 aaKnown RBP28.27■■■□□ 2.12
TMEM54-201ENST00000329151 CRISPLD2Q9H0B8 497 aa28.27■■■□□ 2.12
TMEM54-201ENST00000329151 DDX19BQ9UMR2 479 aa28.27■■■□□ 2.12
TMEM54-201ENST00000329151 USP17L15C9J2P7 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L13C9JLJ4 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L11C9JVI0 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L18D6R9N7 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L22D6RA61 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L17D6RBQ6 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L19D6RCP7 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L20D6RJB6 530 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 GLRX3O76003 335 aaKnown RBP28.26■■■□□ 2.11
TMEM54-201ENST00000329151 CCNA1P78396 465 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 USP17L24Q0WX57 530 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms