RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SHOX2O60902 331 aaPredicted RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 ARHGAP25P42331 645 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 TOB1P50616 345 aaPredicted RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 WASF1Q92558 559 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 FAM204AQ9H8W3 233 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 SERTAD1Q9UHV2 236 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 GLI3P10071 1580 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 LAMB4A4D0S4 1761 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 LIFRP42702 1097 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 WASHC4Q2M389 1173 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 MYH7P12883 1935 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 GPAA1O43292 621 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 ZBTB43O43298 467 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 MMP1P03956 469 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 GYPCP04921 128 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 RHOXF2BP0C7M4 288 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 ATP2B1P20020 1258 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 TRIM14Q14142 442 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 ATRIPQ8WXE1 791 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 RHOXF2Q9BQY4 288 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 MYO6Q9UM54 1294 aa12.78□□□□□ -0.36
GINS3-202ENST00000328514 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
GINS3-202ENST00000328514 A0A087WUV0 522 aaPredicted RBP12.77□□□□□ -0.37
GINS3-202ENST00000328514 PSMD14O00487 310 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 RNF40O75150 1001 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 PHKG2P15735 406 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 IFNAR1P17181 557 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 CASP14P31944 242 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 USP14P54578 494 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.37
GINS3-202ENST00000328514 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.37
GINS3-202ENST00000328514 ZNF827Q17R98 1081 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 NOA1Q8NC60 698 aaKnown RBP12.77□□□□□ -0.37
GINS3-202ENST00000328514 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 PHKBQ93100 1093 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
GINS3-202ENST00000328514 LRP6O75581 1613 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 NUP188Q5SRE5 1749 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 SYNRGQ9UMZ2 1314 aa12.77□□□□□ -0.37
GINS3-202ENST00000328514 MYO5AQ9Y4I1 1855 aaKnown RBP12.76□□□□□ -0.37
GINS3-202ENST00000328514 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
GINS3-202ENST00000328514 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 GSDMAQ96QA5 445 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
GINS3-202ENST00000328514 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
GINS3-202ENST00000328514 HPCAL4Q9UM19 191 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
GINS3-202ENST00000328514 ERVK-24P63145 666 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 GRIN1Q05586 938 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 SSRP1Q08945 709 aaKnown RBP12.76□□□□□ -0.37
GINS3-202ENST00000328514 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 COG1Q8WTW3 980 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
GINS3-202ENST00000328514 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 STRN4Q9NRL3 753 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
GINS3-202ENST00000328514 AATFQ9NY61 560 aaKnown RBP eCLIP12.76□□□□□ -0.37
GINS3-202ENST00000328514 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 ALX1Q15699 326 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
GINS3-202ENST00000328514 DIS3L2Q8IYB7 885 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms