RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 LTN1O94822 1766 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 SNAP23O00161 211 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 GPTP24298 496 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 E2F4Q16254 413 aa16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 TTC19Q6DKK2 380 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-201ENST00000326828 RNF225M0QZC1 329 aaPredicted RBP16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 PACS2Q86VP3 889 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 NAPGQ99747 312 aaPredicted RBP16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 MCAMP43121 646 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 FILIP1LQ4L180 1135 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 AIDAQ96BJ3 306 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 ZSWIM5Q9P217 1185 aa16.22■□□□□ 0.19
CHRNA3-201ENST00000326828 CYP27B1O15528 508 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 PRDM1O75626 825 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 MORC3Q14149 939 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 TTC31Q49AM3 519 aaPredicted RBP16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 A0A087X0B3 334 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 RNF40O75150 1001 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 PLCD1P51178 756 aa16.21■□□□□ 0.19
CHRNA3-201ENST00000326828 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 GYPCP04921 128 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 IVLP07476 585 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 LRRC31Q6UY01 552 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 POLD4Q9HCU8 107 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 ATG3Q9NT62 314 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.18
CHRNA3-201ENST00000326828 MFAP3LO75121 409 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 ZFYP08048 801 aaPredicted RBP16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 CHP1Q99653 195 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 A0A1B0GTH6 734 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 ERVK-24P63145 666 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 NTRK3Q16288 839 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 LDHAL6AQ6ZMR3 332 aa16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
CHRNA3-201ENST00000326828 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 GPATCH11Q8N954 259 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 CAGE1Q8TC20 777 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 NAPBQ9H115 298 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 PTPREP23469 700 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 KRT9P35527 623 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 ZNF174Q15697 407 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 PANX2Q96RD6 677 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 MYO6Q9UM54 1294 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 PRKAB2O43741 272 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 NOP2P46087 812 aaKnown RBP16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 RRAGBQ5VZM2 374 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 IGDCC4Q8TDY8 1250 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
CHRNA3-201ENST00000326828 MMP1P03956 469 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 RTN1Q16799 776 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 EHD4Q9H223 541 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 CPDO75976 1380 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 MRC1P22897 1456 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 ACTN4O43707 911 aaKnown RBP16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 DPYDQ12882 1025 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 PSMB7Q99436 277 aa16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
CHRNA3-201ENST00000326828 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 SYMPKQ92797 1274 aaKnown RBP16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 MIGA1Q8NAN2 632 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 GPR108Q9NPR9 543 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 PSD3Q9NYI0 1048 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 BAZ2BQ9UIF8 2168 aaKnown RBP16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 MBD4O95243 580 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 TDO2P48775 406 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 LIG3P49916 1009 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 AFAP1L1Q8TED9 768 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 JRKLQ9Y4A0 524 aa16.17■□□□□ 0.18
CHRNA3-201ENST00000326828 MINDY4BA8MYZ0 360 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 WNT7AO00755 349 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 PHKA1P46020 1223 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 CNGA4Q8IV77 575 aa16.16■□□□□ 0.18
CHRNA3-201ENST00000326828 MMS19Q96T76 1030 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms