RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
ABCF1-201ENST00000326195 PSEN1P49768 467 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 EIF6P56537 245 aaKnown RBP11.9□□□□□ -0.5
ABCF1-201ENST00000326195 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
ABCF1-201ENST00000326195 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.51
ABCF1-201ENST00000326195 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.51
ABCF1-201ENST00000326195 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.51
ABCF1-201ENST00000326195 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.51
ABCF1-201ENST00000326195 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 CCZ1BP86790 482 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 CEBPZQ03701 1054 aaKnown RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 COA1Q9GZY4 146 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 MAGEB6P1A0A0J9YX57 407 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 ARHGAP29Q52LW3 1261 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 TTC14Q96N46 770 aa11.89□□□□□ -0.51
ABCF1-201ENST00000326195 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
ABCF1-201ENST00000326195 SASH3O75995 380 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 CYP2D6P10635 497 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 BTDP43251 543 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ZNF165P49910 485 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 FAM193AP78312 1265 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 COL9A3Q14050 684 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ASTN2O75129 1339 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 MAST3O60307 1309 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ZSCAN26Q16670 478 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 RGL2O15211 777 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 TNMDQ9H2S6 317 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-201ENST00000326195 ZNRF3Q9ULT6 936 aa11.88□□□□□ -0.51
ABCF1-201ENST00000326195 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-201ENST00000326195 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 GRM1Q13255 1194 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 KRT32Q14532 448 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 TTF1Q15361 905 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-201ENST00000326195 REXO1L1PQ8IX06 675 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 NAPBQ9H115 298 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-201ENST00000326195 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-201ENST00000326195 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 CASQ1P31415 396 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 ZNF384Q8TF68 577 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 C10orf71Q711Q0 1435 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 NR1I2O75469 434 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 EPS15P42566 896 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
ABCF1-201ENST00000326195 ADD2P35612 726 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 MMP14P50281 582 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-201ENST00000326195 NSUN4Q96CB9 384 aaKnown RBP11.86□□□□□ -0.51
ABCF1-201ENST00000326195 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-201ENST00000326195 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-201ENST00000326195 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 NFIAQ12857 509 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 SF3A1Q15459 793 aaKnown RBP11.86□□□□□ -0.51
ABCF1-201ENST00000326195 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 ICE2Q659A1 982 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 DYNLL2Q96FJ2 89 aa11.86□□□□□ -0.51
ABCF1-201ENST00000326195 CACNA1SQ13698 1873 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms