RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TOB1P50616 345 aaPredicted RBP22.79■■□□□ 1.24
SOX2-201ENST00000325404 CTDSPL2Q05D32 466 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 WTAPQ15007 396 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 CCDC152Q4G0S7 254 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 DIS3L2Q8IYB7 885 aaKnown RBP22.79■■□□□ 1.24
SOX2-201ENST00000325404 SRRTQ9BXP5 876 aaKnown RBP22.79■■□□□ 1.24
SOX2-201ENST00000325404 TACC3Q9Y6A5 838 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 TOP1P11387 765 aaKnown RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 ISM2Q6H9L7 571 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 SYT10Q6XYQ8 523 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 CRACR2BQ8N4Y2 399 aaPredicted RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 ENOX1Q8TC92 643 aaKnown RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 DPF2Q92785 391 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 MYL10Q9BUA6 226 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 ARMT1Q9H993 441 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 BTBD18B2RXH4 712 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 ZSCAN12O43309 604 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 TBX2Q13207 712 aaPredicted RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 FANCLQ9NW38 375 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 PODXL2Q9NZ53 605 aa22.78■■□□□ 1.24
SOX2-201ENST00000325404 SRPRBQ9Y5M8 271 aaKnown RBP22.78■■□□□ 1.24
SOX2-201ENST00000325404 ERICH2A1L162 156 aa22.77■■□□□ 1.24
SOX2-201ENST00000325404 POSTNQ15063 836 aa22.77■■□□□ 1.24
SOX2-201ENST00000325404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.77■■□□□ 1.24
SOX2-201ENST00000325404 GNPATO15228 680 aa22.77■■□□□ 1.24
SOX2-201ENST00000325404 ARHGAP6O43182 974 aa22.77■■□□□ 1.24
SOX2-201ENST00000325404 INCENPQ9NQS7 918 aa22.77■■□□□ 1.24
SOX2-201ENST00000325404 GOLGA6L9A6NEM1 432 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 BMP6P22004 513 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 ELF2Q15723 593 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 MPHOSPH8Q99549 860 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 NARFQ9UHQ1 456 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 ANAPC4Q9UJX5 808 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 MAN1B1Q9UKM7 699 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 ZNF18P17022 549 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 MORC3Q14149 939 aa22.76■■□□□ 1.23
SOX2-201ENST00000325404 H2AFXP16104 143 aaPredicted RBP22.75■■□□□ 1.23
SOX2-201ENST00000325404 TDO2P48775 406 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 FBXO38Q6PIJ6 1188 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 TRIM65Q6PJ69 517 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 KRT222Q8N1A0 295 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 HELBQ8NG08 1087 aaPredicted RBP22.75■■□□□ 1.23
SOX2-201ENST00000325404 SPATA20Q8TB22 786 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 SLC4A4Q9Y6R1 1079 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 GUCY1A2P33402 732 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 REXO1L1PQ8IX06 675 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 FANCBQ8NB91 859 aa22.75■■□□□ 1.23
SOX2-201ENST00000325404 RTCBQ9Y3I0 505 aaKnown RBP22.75■■□□□ 1.23
SOX2-201ENST00000325404 HOMER1Q86YM7 354 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 TMEM139Q8IV31 216 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 RNF26Q9BY78 433 aaPredicted RBP22.74■■□□□ 1.23
SOX2-201ENST00000325404 SEC31BQ9NQW1 1179 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 LAMB2P55268 1798 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 ERCC5P28715 1186 aaPredicted RBP22.74■■□□□ 1.23
SOX2-201ENST00000325404 PDE4BQ07343 736 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 SMIM5Q71RC9 77 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 LCORLQ8N3X6 602 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 SMARCE1Q969G3 411 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 CCDC34Q96HJ3 373 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 SBF2Q86WG5 1849 aa22.74■■□□□ 1.23
SOX2-201ENST00000325404 STX10O60499 249 aa22.73■■□□□ 1.23
SOX2-201ENST00000325404 FAM193AP78312 1265 aa22.73■■□□□ 1.23
SOX2-201ENST00000325404 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
SOX2-201ENST00000325404 INTS13Q9NVM9 706 aa22.73■■□□□ 1.23
SOX2-201ENST00000325404 ZPR1O75312 459 aa22.73■■□□□ 1.23
SOX2-201ENST00000325404 IGHMBP2P38935 993 aaKnown RBP22.73■■□□□ 1.23
SOX2-201ENST00000325404 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
SOX2-201ENST00000325404 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 LY75O60449 1722 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 POLR2DO15514 142 aaKnown RBP22.72■■□□□ 1.23
SOX2-201ENST00000325404 PRKAB2O43741 272 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 ERFEQ4G0M1 354 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 TBC1D9BQ66K14 1250 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 KCNJ14Q9UNX9 436 aa22.72■■□□□ 1.23
SOX2-201ENST00000325404 ACTN4O43707 911 aaKnown RBP22.71■■□□□ 1.23
SOX2-201ENST00000325404 BMP15O95972 392 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 XBP1P17861 261 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 SPECC1LQ69YQ0 1117 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 AATFQ9NY61 560 aaKnown RBP eCLIP22.71■■□□□ 1.23
SOX2-201ENST00000325404 SRP68Q9UHB9 627 aaKnown RBP22.71■■□□□ 1.23
SOX2-201ENST00000325404 SERTAD1Q9UHV2 236 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 TMEM232C9JQI7 657 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 TPM1P09493 284 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 PPARAQ07869 468 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 SEC23AQ15436 765 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.71■■□□□ 1.23
SOX2-201ENST00000325404 DNAI1Q9UI46 699 aa22.71■■□□□ 1.23
SOX2-201ENST00000325404 V9GYY5 206 aaPredicted RBP22.71■■□□□ 1.23
SOX2-201ENST00000325404 FOXN1O15353 648 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 GTF2E1P29083 439 aaPredicted RBP22.7■■□□□ 1.22
SOX2-201ENST00000325404 ESR2Q92731 530 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 UBAC1Q9BSL1 405 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 NFE2L3Q9Y4A8 694 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 PCDHB6Q9Y5E3 794 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 PCP11498 1178 aaKnown RBP22.7■■□□□ 1.22
SOX2-201ENST00000325404 PLCD1P51178 756 aa22.7■■□□□ 1.22
SOX2-201ENST00000325404 RRP12Q5JTH9 1297 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms