RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 AP5M1Q9H0R1 490 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 GPR108Q9NPR9 543 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PALLDQ8WX93 1383 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ZEB2O60315 1214 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 TXKP42681 527 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 SCNN1DP51172 638 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 KIF5AQ12840 1032 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ZNF174Q15697 407 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 TTC38Q5R3I4 469 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
CD28-201ENST00000324106 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 SNX29Q8TEQ0 813 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 DACT1Q9NYF0 836 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 CNPY2Q9Y2B0 182 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ATP6V0A2Q9Y487 856 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ELP1O95163 1332 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 MBD5Q9P267 1494 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ROBO2Q9HCK4 1378 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 MYO3BQ8WXR4 1341 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
CD28-201ENST00000324106 KRT86O43790 486 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 CIAO1O76071 339 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 NCAPG2Q86XI2 1143 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 HECW2Q9P2P5 1572 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 SGSM2O43147 1006 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PDE6AP16499 860 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 C2orf69Q8N8R5 385 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PSMD1Q99460 953 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 IQCGQ9H095 443 aaKnown RBP10.04□□□□□ -0.8
CD28-201ENST00000324106 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 INCENPQ9NQS7 918 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 SPATA31A6Q5VVP1 1343 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 SLC27A2O14975 620 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 RLBP1P12271 317 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 CALCRLQ16602 461 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 RNF34Q969K3 372 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.03□□□□□ -0.8
CD28-201ENST00000324106 KDM3AQ9Y4C1 1321 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 TUBB4AP04350 444 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 SLFN13Q68D06 897 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 FAM193BQ96PV7 902 aaPredicted RBP10.03□□□□□ -0.8
CD28-201ENST00000324106 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 ESPNB1AK53 854 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 DCAF17Q5H9S7 520 aaPredicted RBP10.03□□□□□ -0.8
CD28-201ENST00000324106 SLC10A4Q96EP9 437 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 CSRNP2Q9H175 543 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 NRBP2Q9NSY0 501 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 TXNDC16Q9P2K2 825 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
CD28-201ENST00000324106 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 CDHR1Q96JP9 859 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 COA1Q9GZY4 146 aa10.03□□□□□ -0.8
CD28-201ENST00000324106 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.8
CD28-201ENST00000324106 LIN9Q5TKA1 542 aa10.02□□□□□ -0.8
CD28-201ENST00000324106 CCDC125Q86Z20 511 aa10.02□□□□□ -0.8
CD28-201ENST00000324106 EXOC8Q8IYI6 725 aa10.02□□□□□ -0.8
CD28-201ENST00000324106 LUC7L2Q9Y383 392 aaKnown RBP10.02□□□□□ -0.8
CD28-201ENST00000324106 BCAMP50895 628 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 GRAPQ13588 217 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 CCDC129Q6ZRS4 1044 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 GRAPLQ8TC17 118 aaPredicted RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 KANSL2Q9H9L4 492 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 CFAP65Q6ZU64 1925 aaKnown RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 XPOTO43592 962 aaKnown RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 JAKMIP2Q96AA8 810 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 MAK16Q9BXY0 300 aaKnown RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 WDR70Q9NW82 654 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 NDC80O14777 642 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 CUTAO60888 179 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 ATP2A2P16615 1042 aaKnown RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 BIRC2Q13490 618 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 ELMSAN1Q6PJG2 1045 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
CD28-201ENST00000324106 PSTPIP2Q9H939 334 aa10.02□□□□□ -0.81
CD28-201ENST00000324106 A2ML1A8K2U0 1454 aa10.01□□□□□ -0.81
CD28-201ENST00000324106 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
CD28-201ENST00000324106 OVOS2A0A0G2JMS6 1433 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms