RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SMIM24O75264 130 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 KLHL7Q8IXQ5 586 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 TACO1Q9BSH4 297 aaKnown RBP18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 NOS1P29475 1434 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 PFDN1O60925 122 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 CTTNBP2NLQ9P2B4 639 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 WWC3Q9ULE0 1092 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 AOX1Q06278 1338 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 EXOC5O00471 708 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 ZNF174Q15697 407 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 CEP85Q6P2H3 762 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 ARHGAP4P98171 946 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 EFCAB8A8MWE9 144 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 SESN3P58005 492 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 STRN3Q13033 797 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 RPS6KA2Q15349 733 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 BACH1O14867 736 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 BEND3Q5T5X7 828 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 PDCD2Q16342 344 aaPredicted RBP18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
SMCHD1-201ENST00000320876 INPP1P49441 399 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 LETM2Q2VYF4 491 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 SND1Q7KZF4 910 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 AFG3L2Q9Y4W6 797 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 TYW1Q9NV66 732 aaKnown RBP18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 NELFBQ8WX92 580 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 GOLGA8QA0A0J9YX86 632 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 GOLGA8OA6NCC3 632 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 GOLGA8NF8WBI6 632 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 PAXIP1Q6ZW49 1069 aaPredicted RBP18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 PROCA1Q8NCQ7 364 aaPredicted RBP18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 TMEM87BQ96K49 555 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 CCDC13Q8IYE1 715 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 EPS15L1Q9UBC2 864 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 DRC3Q9H069 523 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 MTX1Q13505 466 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMCHD1-201ENST00000320876 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 BANK1Q8NDB2 785 aa18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 VTI1AQ96AJ9 217 aa18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 AMFRQ9UKV5 643 aa18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 ANGEL1Q9UNK9 670 aaKnown RBP18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 CXorf38Q8TB03 319 aa18.64■□□□□ 0.58
SMCHD1-201ENST00000320876 ABCC1P33527 1531 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 NSMCE1Q8WV22 266 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 RSAD2Q8WXG1 361 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 VPS37BQ9H9H4 285 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 RRAGDQ9NQL2 400 aaPredicted RBP18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 GNGT1P63211 74 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 DACT3Q96B18 629 aaPredicted RBP18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 PSMB7Q99436 277 aa18.64■□□□□ 0.57
SMCHD1-201ENST00000320876 PEX19P40855 299 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 RXRAP19793 462 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 CLTAP09496 248 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 SERPINB6P35237 376 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 NUP160Q12769 1436 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 SPECC1L-ADORA2AF8WAN1 911 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 TRIM6Q9C030 488 aaPredicted RBP18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 C17orf53Q8N3J3 647 aaPredicted RBP18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
SMCHD1-201ENST00000320876 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 RAD51AP2Q09MP3 1159 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 HAUS1Q96CS2 278 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 PHF8Q9UPP1 1060 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 MRPL44Q9H9J2 332 aaKnown RBP18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 GUCY2FP51841 1108 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 PDZD8Q8NEN9 1154 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 NFE2L3Q9Y4A8 694 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 TMOD4Q9NZQ9 345 aa18.62■□□□□ 0.57
SMCHD1-201ENST00000320876 RIC8AQ9NPQ8 531 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 ZNF622Q969S3 477 aaKnown RBP eCLIP18.61■□□□□ 0.576e-7■■□□□ 13.5
SMCHD1-201ENST00000320876 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 THAP12O43422 761 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 PPP2R5DQ14738 602 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 CALCRLQ16602 461 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 TYW1BQ6NUM6 668 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 EFCAB13Q8IY85 973 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 LONRF2Q1L5Z9 754 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 EFCC1Q9HA90 598 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 CCDC169A6NNP5 214 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms