RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.53
USH1C-202ENST00000318024 GSDMDP57764 484 aa18.33■□□□□ 0.53
USH1C-202ENST00000318024 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.53
USH1C-202ENST00000318024 MFSD14BQ5SR56 506 aa18.33■□□□□ 0.53
USH1C-202ENST00000318024 FMR1NBQ8N0W7 255 aaPredicted RBP18.33■□□□□ 0.53
USH1C-202ENST00000318024 IMPACTQ9P2X3 320 aa18.33■□□□□ 0.53
USH1C-202ENST00000318024 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.53
USH1C-202ENST00000318024 BECN2A8MW95 431 aa18.33■□□□□ 0.52
USH1C-202ENST00000318024 KCNJ6P48051 423 aa18.33■□□□□ 0.52
USH1C-202ENST00000318024 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
USH1C-202ENST00000318024 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 B4E1Z4 1266 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 PRC1O43663 620 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 TRDNQ13061 729 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
USH1C-202ENST00000318024 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
USH1C-202ENST00000318024 G3V3G9 751 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 ANTXR2P58335 489 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 FAM193AP78312 1265 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 SLC4A8Q2Y0W8 1093 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 CCDC73Q6ZRK6 1079 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 CNKSR1Q969H4 720 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 BPIFA3Q9BQP9 254 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 DBNDD1Q9H9R9 158 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 C21orf2O43822 256 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 KINO60870 393 aaKnown RBP18.31■□□□□ 0.52
USH1C-202ENST00000318024 EVX2Q03828 476 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
USH1C-202ENST00000318024 CEP57L1Q8IYX8 460 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
USH1C-202ENST00000318024 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
USH1C-202ENST00000318024 F8W031 263 aaPredicted RBP18.3■□□□□ 0.52
USH1C-202ENST00000318024 R3HDM1Q15032 1099 aaKnown RBP18.3■□□□□ 0.52
USH1C-202ENST00000318024 ARMCX5Q6P1M9 558 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 COA1Q9GZY4 146 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 FSIP1Q8NA03 581 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 PPP1R13BQ96KQ4 1090 aa18.3■□□□□ 0.52
USH1C-202ENST00000318024 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
USH1C-202ENST00000318024 PPARAQ07869 468 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 RAB11FIP4Q86YS3 637 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 ZNF396Q96N95 335 aaPredicted RBP18.29■□□□□ 0.52
USH1C-202ENST00000318024 PCDHA7Q9UN72 937 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 DUOX1Q9NRD9 1551 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 SLX4Q8IY92 1834 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 A0A1W2PQ27 194 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 A0A1W2PQ64 194 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 A0A1W2PQD8 194 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 DPEP1P16444 411 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 LRRN4CLQ8ND94 238 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
USH1C-202ENST00000318024 ERCC4Q92889 916 aaPredicted RBP18.29■□□□□ 0.52
USH1C-202ENST00000318024 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
USH1C-202ENST00000318024 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 USP17L21D6R901 530 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 CREBRFQ8IUR6 639 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 SH3RF3Q8TEJ3 882 aaPredicted RBP18.28■□□□□ 0.52
USH1C-202ENST00000318024 CRNKL1Q9BZJ0 848 aaKnown RBP18.28■□□□□ 0.52
USH1C-202ENST00000318024 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
USH1C-202ENST00000318024 ST7Q9NRC1 585 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
USH1C-202ENST00000318024 ZBTB22O15209 634 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 NCAPHQ15003 741 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.52
USH1C-202ENST00000318024 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
USH1C-202ENST00000318024 CERS5Q8N5B7 392 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 CCDC150Q8NCX0 1101 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.52
USH1C-202ENST00000318024 EYA3Q99504 573 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 ZKSCAN3Q9BRR0 538 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 NAT10Q9H0A0 1025 aaKnown RBP18.27■□□□□ 0.52
USH1C-202ENST00000318024 KIAA1468Q9P260 1216 aa18.27■□□□□ 0.52
USH1C-202ENST00000318024 PRDM1O75626 825 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 KCNA3P22001 575 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 PDIA3P30101 505 aaKnown RBP18.26■□□□□ 0.51
USH1C-202ENST00000318024 GSTO1P78417 241 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 AOC3Q16853 763 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 ERCC6LQ2NKX8 1250 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 DPCR1Q3MIW9 517 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 XPO4Q9C0E2 1151 aaKnown RBP18.26■□□□□ 0.51
USH1C-202ENST00000318024 SENP2Q9HC62 589 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 TUBB4AP04350 444 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 CYP2D6P10635 497 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms