RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 AATFQ9NY61 560 aaKnown RBP eCLIP23.76■■□□□ 1.39
TTC39C-202ENST00000317571 SBF2Q86WG5 1849 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 KIAA1551Q9HCM1 1747 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 PLEKHA8P1O95397 391 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 FBXO2Q9UK22 296 aaPredicted RBP23.76■■□□□ 1.39
TTC39C-202ENST00000317571 CCNL1Q9UK58 526 aaPredicted RBP23.76■■□□□ 1.39
TTC39C-202ENST00000317571 LAMB1P07942 1786 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 HIBADHP31937 336 aaKnown RBP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 CHAF1AQ13111 956 aaPredicted RBP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 MAP7D2Q96T17 732 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 CCDC196A0A1B0GTZ2 297 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 SEMA3EO15041 775 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 ZPR1O75312 459 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 CYP2D6P10635 497 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 EARS2Q5JPH6 523 aaKnown RBP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 FILIP1Q7Z7B0 1213 aa23.75■■□□□ 1.39
TTC39C-202ENST00000317571 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 DCP1AQ9NPI6 582 aaPredicted RBP23.75■■□□□ 1.39
TTC39C-202ENST00000317571 MAST2Q6P0Q8 1798 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 NMT2O60551 498 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 TROAPQ12815 778 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 KRI1Q8N9T8 703 aaKnown RBP23.74■■□□□ 1.39
TTC39C-202ENST00000317571 VPS54Q9P1Q0 977 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 KCNH3Q9ULD8 1083 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 SAFBQ15424 915 aaKnown RBP eCLIP23.74■■□□□ 1.39
TTC39C-202ENST00000317571 KRBA2Q6ZNG9 492 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 RNF26Q9BY78 433 aaPredicted RBP23.74■■□□□ 1.39
TTC39C-202ENST00000317571 PDS5AQ29RF7 1337 aaKnown RBP23.74■■□□□ 1.39
TTC39C-202ENST00000317571 LY75O60449 1722 aa23.74■■□□□ 1.39
TTC39C-202ENST00000317571 XPO4Q9C0E2 1151 aaKnown RBP23.73■■□□□ 1.39
TTC39C-202ENST00000317571 PTPREP23469 700 aa23.73■■□□□ 1.39
TTC39C-202ENST00000317571 CCZ1BP86790 482 aa23.73■■□□□ 1.39
TTC39C-202ENST00000317571 CCZ1P86791 482 aaPredicted RBP23.73■■□□□ 1.39
TTC39C-202ENST00000317571 BMP6P22004 513 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 ZRSR1Q15695 479 aaKnown RBP23.72■■□□□ 1.39
TTC39C-202ENST00000317571 IFIT1BQ5T764 474 aaKnown RBP23.72■■□□□ 1.39
TTC39C-202ENST00000317571 TPTE2Q6XPS3 522 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 RTCBQ9Y3I0 505 aaKnown RBP23.72■■□□□ 1.39
TTC39C-202ENST00000317571 WNT7AO00755 349 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 GTF2F1P35269 517 aaKnown RBP eCLIP23.72■■□□□ 1.39
TTC39C-202ENST00000317571 MDM2Q00987 491 aaPredicted RBP23.72■■□□□ 1.39
TTC39C-202ENST00000317571 RILPL1Q5EBL4 403 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 ANKRD2Q9GZV1 360 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 IFNKQ9P0W0 207 aa23.72■■□□□ 1.39
TTC39C-202ENST00000317571 CCDC88AQ3V6T2 1871 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 USP27XA6NNY8 438 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 ATP1A3P13637 1013 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 NOM1Q5C9Z4 860 aaKnown RBP23.71■■□□□ 1.39
TTC39C-202ENST00000317571 C16orf45Q96MC5 204 aaPredicted RBP23.71■■□□□ 1.39
TTC39C-202ENST00000317571 CABP5Q9NP86 173 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 ATP2B1P20020 1258 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 FAM47AQ5JRC9 791 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 USP49Q70CQ1 688 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 PCDHA5Q9Y5H7 936 aa23.71■■□□□ 1.39
TTC39C-202ENST00000317571 NPY5RQ15761 445 aa23.7■■□□□ 1.38
TTC39C-202ENST00000317571 PHF20Q9BVI0 1012 aa23.7■■□□□ 1.38
TTC39C-202ENST00000317571 LMOD1P29536 600 aaPredicted RBP23.7■■□□□ 1.38
TTC39C-202ENST00000317571 SLC4A8Q2Y0W8 1093 aa23.7■■□□□ 1.38
TTC39C-202ENST00000317571 CNNM3Q8NE01 707 aa23.7■■□□□ 1.38
TTC39C-202ENST00000317571 V9GY48 417 aaPredicted RBP23.7■■□□□ 1.38
TTC39C-202ENST00000317571 RIOK3O14730 519 aaKnown RBP23.69■■□□□ 1.38
TTC39C-202ENST00000317571 PRR29P0C7W0 189 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 PDE4BQ07343 736 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 USP21Q9UK80 565 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 BAZ2BQ9UIF8 2168 aaKnown RBP23.69■■□□□ 1.38
TTC39C-202ENST00000317571 PRPF3O43395 683 aaKnown RBP23.69■■□□□ 1.38
TTC39C-202ENST00000317571 ORC4O43929 436 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 GRIK5Q16478 980 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 CATIPQ7Z7H3 387 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 IQCA1Q86XH1 822 aa23.69■■□□□ 1.38
TTC39C-202ENST00000317571 CNTNAP5Q8WYK1 1306 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 IKBKBO14920 756 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 SMC2O95347 1197 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 NFIXQ14938 502 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 OSBPL5Q9H0X9 879 aaPredicted RBP23.68■■□□□ 1.38
TTC39C-202ENST00000317571 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 SKILP12757 684 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 PPP2R5BQ15173 497 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 TMTC3Q6ZXV5 915 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 ZNF710Q8N1W2 664 aa23.68■■□□□ 1.38
TTC39C-202ENST00000317571 CRNKL1Q9BZJ0 848 aaKnown RBP23.68■■□□□ 1.38
TTC39C-202ENST00000317571 ADAMTS3O15072 1205 aa23.67■■□□□ 1.38
TTC39C-202ENST00000317571 PCP11498 1178 aaKnown RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 GRAMD1CQ8IYS0 662 aa23.67■■□□□ 1.38
TTC39C-202ENST00000317571 SRBD1Q8N5C6 995 aaKnown RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 DPF2Q92785 391 aa23.67■■□□□ 1.38
TTC39C-202ENST00000317571 GPR101Q96P66 508 aaPredicted RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 SERTAD1Q9UHV2 236 aa23.67■■□□□ 1.38
TTC39C-202ENST00000317571 POLR2DO15514 142 aaKnown RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 MTERF4Q7Z6M4 381 aaKnown RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 SRPRBQ9Y5M8 271 aaKnown RBP23.67■■□□□ 1.38
TTC39C-202ENST00000317571 USP17L8P0C7I0 530 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 RCSD1Q6JBY9 416 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 ARMCX5Q6P1M9 558 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 TNFRSF25Q93038 417 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 CSRNP2Q9H175 543 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 ATP8A2Q9NTI2 1148 aa23.66■■□□□ 1.38
TTC39C-202ENST00000317571 DDAH1O94760 285 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms