RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 RSRC1Q96IZ7 334 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 UNC80Q8N2C7 3258 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 RANBP2P49792 3224 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 PPP1R12AO14974 1030 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 EIF6P56537 245 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 AKAP17AQ02040 695 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 ERCC6LQ2NKX8 1250 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 CEP57Q86XR8 500 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 PUF60Q9UHX1 559 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 ZNF462Q96JM2 2506 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 ERLIN1O75477 346 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 DGKZQ13574 1117 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 FAM98CQ17RN3 349 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 KCTD17Q8N5Z5 321 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 CCDC155Q8N6L0 562 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 SLC4A9Q96Q91 983 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 MYO18BQ8IUG5 2567 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 PLCE1Q9P212 2302 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 TEX33O43247 280 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 EPB41L2O43491 1005 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 RAB11FIP3O75154 756 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 SASH3O75995 380 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 XBP1P17861 261 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 CA8P35219 290 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 EZH2Q15910 746 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 KLHL40Q2TBA0 621 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 KRBA2Q6ZNG9 492 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 ZMAT2Q96NC0 199 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 PDGFDQ9GZP0 370 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 BRMS1Q9HCU9 246 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 ARHGEF10O15013 1369 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 STX6O43752 255 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 KIF4AO95239 1232 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 NDUFA8P51970 172 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 PTPN12Q05209 780 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 PPARAQ07869 468 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 SCARA3Q6AZY7 606 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 TBC1D10CQ8IV04 446 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 DHX40Q8IX18 779 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 CLASRPQ8N2M8 674 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 NAP1L4Q99733 375 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 EDC4Q6P2E9 1401 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 RIMBP2O15034 1052 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 DHX16O60231 1041 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 BRPF1P55201 1214 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 FMR1Q06787 632 aaKnown RBP eCLIP4.11□□□□□ -1.75
GEN1-201ENST00000317402 PIH1D3Q9NQM4 214 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 FAM196BA6NMK8 535 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 HIP1O00291 1037 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 RNASE9P60153 205 aaKnown RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 IRX5P78411 483 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 TOGARAM2Q6ZUX3 1019 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 SDR42E1Q8WUS8 393 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 ZNF609O15014 1411 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 CAPN2P17655 700 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 CDC25CP30307 473 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 BMS1Q14692 1282 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 FAM114A1Q8IWE2 563 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 PPP1R13LQ8WUF5 828 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ZNF215Q9UL58 517 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 GOLGA6L9A6NEM1 432 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 CACNB1Q02641 598 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 MAP2K1Q02750 393 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 TRADDQ15628 312 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ARMCX5Q6P1M9 558 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SPATA18Q8TC71 538 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SNX21Q969T3 373 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SCAND2PQ9GZW5 306 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 SAP30BPQ9UHR5 308 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 ZKSCAN5Q9Y2L8 839 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 BECN2A8MW95 431 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 PEX10O60683 326 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ERLIN2O94905 339 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ZSCAN22P10073 491 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 LMOD1P29536 600 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 ANTXR2P58335 489 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 PPP2R3AQ06190 1150 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 GREM2Q9H772 168 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 KDM4FA0A1W2PPD8 638 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 FAM47AQ5JRC9 791 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 GIGYF2Q6Y7W6 1299 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 CCAR1Q8IX12 1150 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 GLIS3Q8NEA6 775 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 PPM1EQ8WY54 764 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 NEDD4P46934 1319 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SLIT1O75093 1534 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ICE2Q659A1 982 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ACRBPQ8NEB7 543 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SLAIN2Q9P270 581 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 WDFY3Q8IZQ1 3526 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 DENND4AQ7Z401 1863 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 H3BQF6 201 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 CD44P16070 742 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 MCM3P25205 808 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 TUBB4BP68371 445 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 SUFUQ9UMX1 484 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 LAMB1P07942 1786 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 ENC1O14682 589 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms