RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 INPP5BP32019 993 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 VEGFBP49765 207 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 PLCD1P51178 756 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
CDC42-201ENST00000315554 VPS53Q5VIR6 699 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 DCAF15Q66K64 600 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 RGMBQ6NW40 437 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 ZNF589Q86UQ0 364 aaPredicted RBP9.43□□□□□ -0.9
CDC42-201ENST00000315554 CERS3Q8IU89 383 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 STK11IPQ8N1F8 1099 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 CAPNS2Q96L46 248 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 ZIC5Q96T25 663 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 ZNF341Q9BYN7 854 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 IL25Q9H293 177 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 ELP3Q9H9T3 547 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42-201ENST00000315554 EPB41L4AQ9HCS5 686 aaPredicted RBP9.43□□□□□ -0.9
CDC42-201ENST00000315554 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.43□□□□□ -0.9
CDC42-201ENST00000315554 NAV1Q8NEY1 1877 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 GSG1L2A8MUP6 293 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 HLA-DOAP06340 250 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 FKBP1BP68106 108 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 SHROOM1Q2M3G4 852 aaPredicted RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 CCDC84Q86UT8 332 aaPredicted RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
CDC42-201ENST00000315554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDC42-201ENST00000315554 KLRG1Q96E93 195 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 HELLSQ9NRZ9 838 aa9.42□□□□□ -0.9
CDC42-201ENST00000315554 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 MINDY4BA8MYZ0 360 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 USP17L21D6R901 530 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 FOXP2O15409 715 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 PBX2P40425 430 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 TDO2P48775 406 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 VGLL4Q14135 290 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 MCMDC2Q4G0Z9 681 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 RASAL3Q86YV0 1011 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 ANKRD13AQ8IZ07 590 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 DNAJC5GQ8N7S2 189 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
CDC42-201ENST00000315554 ATP8A2Q9NTI2 1148 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 PI4KBQ9UBF8 816 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 SIPA1L1O43166 1804 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
CDC42-201ENST00000315554 WDR33Q9C0J8 1336 aaKnown RBP9.41□□□□□ -0.9
CDC42-201ENST00000315554 COL2A1P02458 1487 aaPredicted RBP9.41□□□□□ -0.9
CDC42-201ENST00000315554 DDX60LQ5H9U9 1706 aaKnown RBP9.4□□□□□ -0.9
CDC42-201ENST00000315554 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 FAM155AB1AL88 458 aaPredicted RBP9.4□□□□□ -0.9
CDC42-201ENST00000315554 PATL2C9JE40 543 aaKnown RBP9.4□□□□□ -0.9
CDC42-201ENST00000315554 GDF11O95390 407 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 CHMLP26374 656 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 GJA5P36382 358 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 JAG1P78504 1218 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 IFNL3Q8IZI9 196 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 CSADQ9Y600 493 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 SNCAIPQ9Y6H5 919 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 MYH1P12882 1939 aa9.4□□□□□ -0.9
CDC42-201ENST00000315554 HIP1O00291 1037 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 SLC10A3P09131 477 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 GNAT2P19087 354 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 C12orf60Q5U649 245 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 OPTNQ96CV9 577 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 WNK4Q96J92 1243 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 NAPBQ9H115 298 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 SERPINB13Q9UIV8 391 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 ZNF112Q9UJU3 913 aa9.4□□□□□ -0.91
CDC42-201ENST00000315554 BAZ2AQ9UIF9 1905 aaKnown RBP9.4□□□□□ -0.91
CDC42-201ENST00000315554 TBC1D12O60347 775 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
CDC42-201ENST00000315554 SHMT1P34896 483 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 ECE1P42892 770 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
CDC42-201ENST00000315554 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
CDC42-201ENST00000315554 AMOTL1Q8IY63 956 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 SCYL3Q8IZE3 742 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 NACAP1Q9BZK3 213 aa9.39□□□□□ -0.91
CDC42-201ENST00000315554 ARPP21Q9UBL0 812 aaPredicted RBP9.39□□□□□ -0.91
CDC42-201ENST00000315554 HERC5Q9UII4 1024 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms