RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CCDC73Q6ZRK6 1079 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 MAPKAPK5Q8IW41 473 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 MPNDQ8N594 471 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 RRAGDQ9NQL2 400 aaPredicted RBP21.27■■□□□ 1
CCDC43-201ENST00000315286 KCNJ14Q9UNX9 436 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 COL11A2P13942 1736 aaPredicted RBP21.27■■□□□ 1
CCDC43-201ENST00000315286 NAV1Q8NEY1 1877 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 MMP1P03956 469 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 CALM1P0DP23 149 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 CALM2P0DP24 149 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 CALM3P0DP25 149 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 FAM160A1Q05DH4 1040 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 FUT2Q10981 343 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 FAM163AQ96GL9 167 aaPredicted RBP21.26■□□□□ 0.99
CCDC43-201ENST00000315286 MASTLQ96GX5 879 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 RNF26Q9BY78 433 aaPredicted RBP21.26■□□□□ 0.99
CCDC43-201ENST00000315286 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 MRVI1Q9Y6F6 885 aa21.26■□□□□ 0.99
CCDC43-201ENST00000315286 A0A1W2PQ27 194 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 A0A1W2PQ64 194 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 A0A1W2PQD8 194 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 BTBD18B2RXH4 712 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 DDAH1O94760 285 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 PLEKHA8P1O95397 391 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 PLCD1P51178 756 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 TFAP4Q01664 338 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
CCDC43-201ENST00000315286 SAP30BPQ9UHR5 308 aaKnown RBP21.25■□□□□ 0.99
CCDC43-201ENST00000315286 SLC39A14Q15043 492 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 RCSD1Q6JBY9 416 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 CERS3Q8IU89 383 aa21.25■□□□□ 0.99
CCDC43-201ENST00000315286 MRPS27Q92552 414 aaKnown RBP21.25■□□□□ 0.99
CCDC43-201ENST00000315286 RBM28Q9NW13 759 aaKnown RBP21.25■□□□□ 0.99
CCDC43-201ENST00000315286 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
CCDC43-201ENST00000315286 SAFBQ15424 915 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCDC43-201ENST00000315286 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-201ENST00000315286 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 DIS3L2Q8IYB7 885 aaKnown RBP21.24■□□□□ 0.99
CCDC43-201ENST00000315286 TEX11Q8IYF3 940 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 ROBO3Q96MS0 1386 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 A0A1B0GVL5 298 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 RHBDL3P58872 404 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 AKAP17AQ02040 695 aaKnown RBP21.24■□□□□ 0.99
CCDC43-201ENST00000315286 PKN1Q16512 942 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 NOSTRINQ8IVI9 506 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 FMR1NBQ8N0W7 255 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-201ENST00000315286 MAP3K14Q99558 947 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 MKNK2Q9HBH9 465 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 IL17RBQ9NRM6 502 aa21.24■□□□□ 0.99
CCDC43-201ENST00000315286 GAKO14976 1311 aa21.23■□□□□ 0.99
CCDC43-201ENST00000315286 hCG_1642624A0A1W2PR95 340 aa21.23■□□□□ 0.99
CCDC43-201ENST00000315286 PRPF3O43395 683 aaKnown RBP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 MARCKSP29966 332 aaPredicted RBP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 PTPAQ15257 358 aa21.23■□□□□ 0.99
CCDC43-201ENST00000315286 AXDND1Q5T1B0 1012 aaPredicted RBP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 SLC44A5Q8NCS7 719 aa21.23■□□□□ 0.99
CCDC43-201ENST00000315286 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 V9GY48 417 aaPredicted RBP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
CCDC43-201ENST00000315286 KINO60870 393 aaKnown RBP21.22■□□□□ 0.99
CCDC43-201ENST00000315286 WDHD1O75717 1129 aaPredicted RBP21.22■□□□□ 0.99
CCDC43-201ENST00000315286 PLCG2P16885 1265 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 NDUFA8P51970 172 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 DOK7Q18PE1 504 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 SASS6Q6UVJ0 657 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 TMTC3Q6ZXV5 915 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 SHISA4Q96DD7 197 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 USP25Q9UHP3 1055 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 CTAGE5O15320 804 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
CCDC43-201ENST00000315286 FBXW7Q969H0 707 aa21.22■□□□□ 0.99
CCDC43-201ENST00000315286 FOXP1Q9H334 677 aaPredicted RBP21.22■□□□□ 0.99
CCDC43-201ENST00000315286 ANO8Q9HCE9 1232 aaPredicted RBP21.22■□□□□ 0.99
CCDC43-201ENST00000315286 ESPNB1AK53 854 aa21.21■□□□□ 0.99
CCDC43-201ENST00000315286 ANO6Q4KMQ2 910 aa21.21■□□□□ 0.99
CCDC43-201ENST00000315286 POTEAQ6S8J7 498 aa21.21■□□□□ 0.99
CCDC43-201ENST00000315286 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
CCDC43-201ENST00000315286 SRBD1Q8N5C6 995 aaKnown RBP21.21■□□□□ 0.99
CCDC43-201ENST00000315286 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-201ENST00000315286 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
CCDC43-201ENST00000315286 NT5C2P49902 561 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 NR5A1Q13285 461 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 DGKHQ86XP1 1220 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 C2CD5Q86YS7 1000 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 ZNF444Q8N0Y2 327 aaPredicted RBP21.2■□□□□ 0.99
CCDC43-201ENST00000315286 FAM200AQ8TCP9 573 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 OXER1Q8TDS5 423 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.99
CCDC43-201ENST00000315286 VPS54Q9P1Q0 977 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 DAGLAQ9Y4D2 1042 aa21.2■□□□□ 0.99
CCDC43-201ENST00000315286 FLT1P17948 1338 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 USP17L3A6NCW0 530 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 USP17L4A6NCW7 530 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 PPP6R2O75170 966 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 TOB1P50616 345 aaPredicted RBP21.2■□□□□ 0.98
CCDC43-201ENST00000315286 EZH2Q15910 746 aaKnown RBP21.2■□□□□ 0.98
CCDC43-201ENST00000315286 USP17L1Q7RTZ2 530 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 MYH1P12882 1939 aa21.2■□□□□ 0.98
CCDC43-201ENST00000315286 F8W031 263 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms