RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 RAD51AP2Q09MP3 1159 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 DIS3L2Q8IYB7 885 aaKnown RBP11.34□□□□□ -0.59
GPHN-201ENST00000315266 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
GPHN-201ENST00000315266 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 SAMM50Q9Y512 469 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 MRVI1Q9Y6F6 885 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 TOGARAM1Q9Y4F4 1720 aa11.34□□□□□ -0.59
GPHN-201ENST00000315266 SCRN1Q12765 414 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 LRRC47Q8N1G4 583 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 CYP2D6P10635 497 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 PLS1Q14651 629 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 UBXN4Q92575 508 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 TCP10L2B9ZVM9 353 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 PLSCR1O15162 318 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 PPARAQ07869 468 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 UBE4AQ14139 1066 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
GPHN-201ENST00000315266 TTC14Q96N46 770 aa11.33□□□□□ -0.6
GPHN-201ENST00000315266 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
GPHN-201ENST00000315266 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 COBLO75128 1261 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 PDE6BP35913 854 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 USH1GQ495M9 461 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
GPHN-201ENST00000315266 MMRN2Q9H8L6 949 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 LRRC4BQ9NT99 713 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 USP40Q9NVE5 1235 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
GPHN-201ENST00000315266 KRT40Q6A162 431 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 USP28Q96RU2 1077 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 CDC25AP30304 524 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 KIAA1524Q8TCG1 905 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 IFNKQ9P0W0 207 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 MAGEC2Q9UBF1 373 aaPredicted RBP11.32□□□□□ -0.6
GPHN-201ENST00000315266 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 SALL3Q9BXA9 1300 aa11.32□□□□□ -0.6
GPHN-201ENST00000315266 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
GPHN-201ENST00000315266 POLR3GO15318 223 aaPredicted RBP11.31□□□□□ -0.6
GPHN-201ENST00000315266 GSTO1P78417 241 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 ZMYM1Q5SVZ6 1142 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
GPHN-201ENST00000315266 TNKSO95271 1327 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 NMT2O60551 498 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
GPHN-201ENST00000315266 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
GPHN-201ENST00000315266 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 ZFYVE27Q5T4F4 411 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 SHANK3Q9BYB0 1731 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 C21orf2O43822 256 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 GRAPQ13588 217 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 FILIP1LQ4L180 1135 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 TEX35Q5T0J7 233 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
GPHN-201ENST00000315266 MXD3Q9BW11 206 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 MINPP1Q9UNW1 487 aa11.31□□□□□ -0.6
GPHN-201ENST00000315266 GLI3P10071 1580 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 CALM1P0DP23 149 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 CALM2P0DP24 149 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 CALM3P0DP25 149 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 GYS1P13807 737 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
GPHN-201ENST00000315266 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 UBR2Q8IWV8 1755 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
GPHN-201ENST00000315266 SORBS3O60504 671 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
GPHN-201ENST00000315266 CHRNA5P30532 468 aa11.3□□□□□ -0.6
GPHN-201ENST00000315266 BTDP43251 543 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms