RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 ZSWIM4Q9H7M6 989 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 IGBP1P78318 339 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 GCOM1H8Y6P7 765 aaPredicted RBP15.15■□□□□ 0.02
RFFL-201ENST00000315249 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
RFFL-201ENST00000315249 GCNT3O95395 438 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 MYZAPP0CAP1 466 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 HACE1Q8IYU2 909 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
RFFL-201ENST00000315249 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 STX10O60499 249 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 SLC10A4Q96EP9 437 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 ZMYND15Q9H091 742 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 DYMQ7RTS9 669 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 UQCRHLA0A096LP55 91 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 E7EWF7 191 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 UQCRHP07919 91 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 KRT25Q7Z3Z0 450 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 MAK16Q9BXY0 300 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 MRPL11Q9Y3B7 192 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 ERCC3P19447 782 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 OTUD6AQ7L8S5 288 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 EXOC7Q9UPT5 735 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 CTNND2Q9UQB3 1225 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 TMEM232C9JQI7 657 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 FBXO11Q86XK2 927 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 MRPL44Q9H9J2 332 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 ATP7BP35670 1465 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 MASTLQ96GX5 879 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 SEC62Q99442 399 aaKnown RBP15.14■□□□□ 0.01
RFFL-201ENST00000315249 SNX14Q9Y5W7 946 aa15.14■□□□□ 0.01
RFFL-201ENST00000315249 BEND3Q5T5X7 828 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 PALD1Q9ULE6 856 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 GDF11O95390 407 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
RFFL-201ENST00000315249 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 LRWD1Q9UFC0 647 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 GOLGA6L10A0A0M3HER8 536 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 ZNF654Q8IZM8 581 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
RFFL-201ENST00000315249 CCNA1P78396 465 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 Q3C1V9 767 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 PRR16Q569H4 304 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 GNG11P61952 73 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
RFFL-201ENST00000315249 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 SUGCTQ9HAC7 445 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 GOLGA6L7A0A1B0GV03 622 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 KCTD2Q14681 263 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 RNF181Q9P0P0 153 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 ABCC3O15438 1527 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 SGSM2O43147 1006 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 IREB2P48200 963 aaKnown RBP15.12■□□□□ 0.01
RFFL-201ENST00000315249 POLA2Q14181 598 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
RFFL-201ENST00000315249 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
RFFL-201ENST00000315249 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
RFFL-201ENST00000315249 EAF2Q96CJ1 260 aaPredicted RBP15.12■□□□□ 0.01
RFFL-201ENST00000315249 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 CAVIN2O95810 425 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 MCM3P25205 808 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 PLCD4Q9BRC7 762 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 ABL1P00519 1130 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 MCF2L2Q86YR7 1114 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 FAM193BQ96PV7 902 aaPredicted RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 R3HDM1Q15032 1099 aaKnown RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 KCTD1Q719H9 257 aa15.11■□□□□ 0.01
RFFL-201ENST00000315249 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
RFFL-201ENST00000315249 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms