RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 AGLP35573 1532 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 MON2Q7Z3U7 1717 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 CTNNA2P26232 953 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 DMTNQ08495 405 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 LDHAL6AQ6ZMR3 332 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 AOPEPQ8N6M6 819 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 WHAMMQ8TF30 809 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 TMC4Q7Z404 712 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 CPLX4Q7Z7G2 160 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 FOXP1Q9H334 677 aaPredicted RBP9.84□□□□□ -0.83
COL6A5-202ENST00000312481 PPCSQ9HAB8 311 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 EPB41P11171 864 aaKnown RBP9.84□□□□□ -0.83
COL6A5-202ENST00000312481 IL13P35225 146 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 RTEL1Q9NZ71 1219 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 PATL2C9JE40 543 aaKnown RBP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 POLR3DP05423 398 aaPredicted RBP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ITIH3Q06033 890 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ALCAMQ13740 583 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 GIMAP6Q6P9H5 292 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 SRGAP1Q7Z6B7 1085 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 PTPDC1A2A3K4 754 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ERVV-2B6SEH9 535 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 PRC1O43663 620 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ZNF202O95125 648 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 INPP5BP32019 993 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 C8orf74Q6P047 294 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 MEIS3Q99687 375 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 Q9H521 79 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 PFKFB2O60825 505 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ATP5HO75947 161 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ERCC3P19447 782 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 NR1H3Q13133 447 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 TRIM42Q8IWZ5 723 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ZRANB1Q9UGI0 708 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 MAP3K15Q6ZN16 1313 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 HNRNPCL1O60812 293 aaKnown RBP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 EMBQ6PCB8 327 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 NCAPGQ9BPX3 1015 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL6A5-202ENST00000312481 SPTLC3Q9NUV7 552 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 PAK1Q13153 545 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 KIRREL3Q8IZU9 778 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ATP2A3Q93084 1043 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 ANTXR1Q9H6X2 564 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 POSTNQ15063 836 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 SAR1BQ9Y6B6 198 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 CLGNO14967 610 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 CUL1Q13616 776 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 HSP90AA5PQ58FG0 334 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 CYB5RLQ6IPT4 315 aa9.83□□□□□ -0.84
COL6A5-202ENST00000312481 HSPA8P11142 646 aaKnown RBP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 MYL6BP14649 208 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 UBXN1Q04323 297 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SPDYE3A6NKU9 549 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SMTNP53814 917 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 KLHL10Q6JEL2 608 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 MICU3Q86XE3 530 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 IGSF22Q8N9C0 903 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 ANKRD27Q96NW4 1050 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 ACTR5Q9H9F9 607 aaPredicted RBP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 STK36Q9NRP7 1315 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 LONP1P36776 959 aaKnown RBP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 ARL6IP4Q66PJ3 421 aaKnown RBP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 PNPLA6Q8IY17 1366 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 DDAH1O94760 285 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 RFX1P22670 979 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC122Q5T0U0 273 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 EXOC8Q8IYI6 725 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 NOC2LQ9Y3T9 749 aaKnown RBP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 ERICH4A6NGS2 130 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 CCDC114Q96M63 670 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SEPT6Q14141 434 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 NME9Q86XW9 330 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 MXD3Q9BW11 206 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 PFDN4Q9NQP4 134 aa9.82□□□□□ -0.84
COL6A5-202ENST00000312481 NOL3O60936 208 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 OR8K1Q8NGG5 319 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 MYD88Q99836 296 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 NOP2P46087 812 aaKnown RBP9.81□□□□□ -0.84
COL6A5-202ENST00000312481 STMN2Q93045 179 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 HAUS1Q96CS2 278 aa9.81□□□□□ -0.84
COL6A5-202ENST00000312481 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms