RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
TWNK-201ENST00000311916 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
TWNK-201ENST00000311916 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
TWNK-201ENST00000311916 CRACR2BQ8N4Y2 399 aaPredicted RBP13.44□□□□□ -0.26
TWNK-201ENST00000311916 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
TWNK-201ENST00000311916 FANCLQ9NW38 375 aa13.44□□□□□ -0.26
TWNK-201ENST00000311916 SERTAD1Q9UHV2 236 aa13.44□□□□□ -0.26
TWNK-201ENST00000311916 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 NTSR2O95665 410 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 TOP1P11387 765 aaKnown RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 GOLGA8FQ08AF8 430 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 GOLGA8DPQ0D2H9 430 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 CATIPQ7Z7H3 387 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 GRAMD1CQ8IYS0 662 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 BPIFA3Q9BQP9 254 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 ATRNO75882 1429 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 METTL16Q86W50 562 aaKnown RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 SMAP1Q8IYB5 467 aaPredicted RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 FAM177A1Q8N128 213 aaPredicted RBP13.43□□□□□ -0.26
TWNK-201ENST00000311916 SMARCE1Q969G3 411 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
TWNK-201ENST00000311916 NCAPHQ15003 741 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 CEP131Q9UPN4 1083 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 ITGB4P16144 1822 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 NUP98P52948 1817 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 AFMP43652 599 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
TWNK-201ENST00000311916 DPF2Q92785 391 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 OSBPL5Q9H0X9 879 aaPredicted RBP13.42□□□□□ -0.26
TWNK-201ENST00000311916 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 STK36Q9NRP7 1315 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 BAZ2BQ9UIF8 2168 aaKnown RBP13.42□□□□□ -0.26
TWNK-201ENST00000311916 IKBKBO14920 756 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 POSTNQ15063 836 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 SYT10Q6XYQ8 523 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 DHX58Q96C10 678 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
TWNK-201ENST00000311916 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
TWNK-201ENST00000311916 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 TUBE1Q9UJT0 475 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 MYH3P11055 1940 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 TRIM75PA6NK02 468 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 USP17L21D6R901 530 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
TWNK-201ENST00000311916 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
TWNK-201ENST00000311916 CTIFO43310 598 aaKnown RBP13.4□□□□□ -0.26
TWNK-201ENST00000311916 GPATCH11Q8N954 259 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 ZSCAN10Q96SZ4 725 aaPredicted RBP13.4□□□□□ -0.26
TWNK-201ENST00000311916 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
TWNK-201ENST00000311916 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
TWNK-201ENST00000311916 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
TWNK-201ENST00000311916 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 PTPREP23469 700 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 ZNF174Q15697 407 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 LRP6O75581 1613 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 KRT2P35908 639 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 PDE4BQ07343 736 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 DACH1Q9UI36 760 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 STX17P56962 302 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 GJD4Q96KN9 370 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
TWNK-201ENST00000311916 MINPP1Q9UNW1 487 aa13.39□□□□□ -0.27
TWNK-201ENST00000311916 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms