RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 AFMP43652 599 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 ADKP55263 362 aaKnown RBP29.03■■■□□ 2.24
HOXB3-201ENST00000311626 DMTNQ08495 405 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 A0A087X0B3 334 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 RILPL1Q5EBL4 403 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 DHX58Q96C10 678 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 OGFRQ9NZT2 677 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 LOC102724428A0A0B4J2F2 783 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 SIK1P57059 783 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 BICDL1Q6ZP65 573 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 RGS22Q8NE09 1264 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 SMARCE1Q969G3 411 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 V9GY48 417 aaPredicted RBP29.02■■■□□ 2.24
HOXB3-201ENST00000311626 LRP5O75197 1615 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 COBLO75128 1261 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 SLC4A8Q2Y0W8 1093 aa29.02■■■□□ 2.24
HOXB3-201ENST00000311626 DDX41Q9UJV9 622 aaKnown RBP29.02■■■□□ 2.24
HOXB3-201ENST00000311626 SEC23AQ15436 765 aa29.01■■■□□ 2.23
HOXB3-201ENST00000311626 ENAHQ8N8S7 591 aaPredicted RBP29.01■■■□□ 2.23
HOXB3-201ENST00000311626 FEZ1Q99689 392 aa29.01■■■□□ 2.23
HOXB3-201ENST00000311626 KLHL10Q6JEL2 608 aa29.01■■■□□ 2.23
HOXB3-201ENST00000311626 ZNF397Q8NF99 534 aaPredicted RBP29.01■■■□□ 2.23
HOXB3-201ENST00000311626 BAZ2BQ9UIF8 2168 aaKnown RBP29■■■□□ 2.23
HOXB3-201ENST00000311626 KIF2AO00139 706 aaPredicted RBP29■■■□□ 2.23
HOXB3-201ENST00000311626 STX17P56962 302 aa29■■■□□ 2.23
HOXB3-201ENST00000311626 STAMQ92783 540 aa29■■■□□ 2.23
HOXB3-201ENST00000311626 AK7Q96M32 723 aa29■■■□□ 2.23
HOXB3-201ENST00000311626 ACTN4O43707 911 aaKnown RBP29■■■□□ 2.23
HOXB3-201ENST00000311626 PKN1Q16512 942 aa29■■■□□ 2.23
HOXB3-201ENST00000311626 RNF41Q9H4P4 317 aaPredicted RBP29■■■□□ 2.23
HOXB3-201ENST00000311626 DOCK2Q92608 1830 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 AKAP17AQ02040 695 aaKnown RBP28.99■■■□□ 2.23
HOXB3-201ENST00000311626 ERFEQ4G0M1 354 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 REXO1L1PQ8IX06 675 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 SRPRBQ9Y5M8 271 aaKnown RBP28.99■■■□□ 2.23
HOXB3-201ENST00000311626 CCDC196A0A1B0GTZ2 297 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 NMT2O60551 498 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 TRIM65Q6PJ69 517 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 ESR2Q92731 530 aa28.99■■■□□ 2.23
HOXB3-201ENST00000311626 TAF1P21675 1872 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 ETF1P62495 437 aaKnown RBP28.98■■■□□ 2.23
HOXB3-201ENST00000311626 TMEM139Q8IV31 216 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 SMYD4Q8IYR2 804 aaPredicted RBP28.98■■■□□ 2.23
HOXB3-201ENST00000311626 L2HGDHQ9H9P8 463 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 JAG2Q9Y219 1238 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 STRCQ7RTU9 1775 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 KLRK1P26718 216 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 MORC3Q14149 939 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 ZNF174Q15697 407 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 CCDC93Q567U6 631 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 ZNF384Q8TF68 577 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 ARAP2Q8WZ64 1704 aa28.98■■■□□ 2.23
HOXB3-201ENST00000311626 SARSP49591 514 aaKnown RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 TMTC2Q8N394 836 aa28.97■■■□□ 2.23
HOXB3-201ENST00000311626 RIOK1Q9BRS2 568 aaKnown RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 HOOK1Q9UJC3 728 aaKnown RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 KCNQ2O43526 872 aa28.97■■■□□ 2.23
HOXB3-201ENST00000311626 URI1O94763 535 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 DDB1Q16531 1140 aa28.97■■■□□ 2.23
HOXB3-201ENST00000311626 ZSCAN10Q96SZ4 725 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 COL1A1P02452 1464 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-201ENST00000311626 PARP10Q53GL7 1025 aa28.96■■■□□ 2.23
HOXB3-201ENST00000311626 MARCH10Q8NA82 808 aaPredicted RBP28.96■■■□□ 2.23
HOXB3-201ENST00000311626 IFIT1BQ5T764 474 aaKnown RBP28.96■■■□□ 2.23
HOXB3-201ENST00000311626 TOGARAM2Q6ZUX3 1019 aa28.96■■■□□ 2.23
HOXB3-201ENST00000311626 NID2Q14112 1375 aa28.96■■■□□ 2.23
HOXB3-201ENST00000311626 TIAM2Q8IVF5 1701 aa28.95■■■□□ 2.23
HOXB3-201ENST00000311626 MYH2Q9UKX2 1941 aa28.95■■■□□ 2.23
HOXB3-201ENST00000311626 DESI2Q9BSY9 194 aa28.95■■■□□ 2.23
HOXB3-201ENST00000311626 ZNF446Q9NWS9 450 aa28.95■■■□□ 2.23
HOXB3-201ENST00000311626 ADAMTS3O15072 1205 aa28.95■■■□□ 2.22
HOXB3-201ENST00000311626 VEGFAP15692 232 aaPredicted RBP28.95■■■□□ 2.22
HOXB3-201ENST00000311626 FAM47AQ5JRC9 791 aa28.95■■■□□ 2.22
HOXB3-201ENST00000311626 NHSL1Q5SYE7 1610 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 TRIM75PA6NK02 468 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 PPP2R2CQ9Y2T4 447 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 DOT1LQ8TEK3 1739 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 TEX33O43247 280 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 CD44P16070 742 aaKnown RBP28.94■■■□□ 2.22
HOXB3-201ENST00000311626 ZNF18P17022 549 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 KCNJ6P48051 423 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 BAG1Q99933 345 aaPredicted RBP28.94■■■□□ 2.22
HOXB3-201ENST00000311626 EPC1Q9H2F5 836 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 ST7Q9NRC1 585 aa28.94■■■□□ 2.22
HOXB3-201ENST00000311626 BAZ2AQ9UIF9 1905 aaKnown RBP28.94■■■□□ 2.22
HOXB3-201ENST00000311626 USP17L12C9JPN9 530 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 USP17L21D6R901 530 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 ANKRD18AQ8IVF6 992 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 TC2NQ8N9U0 490 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 MLKLQ8NB16 471 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 CPLX3Q8WVH0 158 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 SYMPKQ92797 1274 aaKnown RBP28.93■■■□□ 2.22
HOXB3-201ENST00000311626 MYH14Q7Z406 1995 aaKnown RBP28.93■■■□□ 2.22
HOXB3-201ENST00000311626 BCORQ6W2J9 1755 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 VWA3AA6NCI4 1184 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 FUT2Q10981 343 aa28.93■■■□□ 2.22
HOXB3-201ENST00000311626 RNF26Q9BY78 433 aaPredicted RBP28.93■■■□□ 2.22
HOXB3-201ENST00000311626 KRT2P35908 639 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms