RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 RNF26Q9BY78 433 aaPredicted RBP27.45■■□□□ 1.98
SNCB-201ENST00000310112 MYH1P12882 1939 aa27.45■■□□□ 1.98
SNCB-201ENST00000310112 TGFB2P61812 414 aa27.44■■□□□ 1.98
SNCB-201ENST00000310112 CCDC144CPQ8IYA2 1237 aa27.44■■□□□ 1.98
SNCB-201ENST00000310112 NUP133Q8WUM0 1156 aa27.44■■□□□ 1.98
SNCB-201ENST00000310112 LEO1Q8WVC0 666 aaPredicted RBP27.44■■□□□ 1.98
SNCB-201ENST00000310112 ZDHHC15Q96MV8 337 aa27.44■■□□□ 1.98
SNCB-201ENST00000310112 SLC26A6Q9BXS9 759 aa27.44■■□□□ 1.98
SNCB-201ENST00000310112 PDGFDQ9GZP0 370 aaPredicted RBP27.44■■□□□ 1.98
SNCB-201ENST00000310112 MRE11P49959 708 aa27.43■■□□□ 1.98
SNCB-201ENST00000310112 TFAP4Q01664 338 aa27.43■■□□□ 1.98
SNCB-201ENST00000310112 TMEM63CQ9P1W3 806 aa27.43■■□□□ 1.98
SNCB-201ENST00000310112 POLD1P28340 1107 aa27.42■■□□□ 1.98
SNCB-201ENST00000310112 TROAPQ12815 778 aa27.42■■□□□ 1.98
SNCB-201ENST00000310112 NBPF11Q86T75 865 aa27.42■■□□□ 1.98
SNCB-201ENST00000310112 RCOR1Q9UKL0 485 aa27.42■■□□□ 1.98
SNCB-201ENST00000310112 MYO3BQ8WXR4 1341 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 GOLGA6L4A6NEF3 574 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 C21orf2O43822 256 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 CRKP46108 304 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 PLCD1P51178 756 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 FOSBP53539 338 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 AKAP17AQ02040 695 aaKnown RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 FAM47AQ5JRC9 791 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 CCDC183Q5T5S1 534 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 FAM173BQ6P4H8 233 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 CTCFLQ8NI51 663 aaPredicted RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 PHKBQ93100 1093 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 USP40Q9NVE5 1235 aa27.41■■□□□ 1.98
SNCB-201ENST00000310112 ZNF219Q9P2Y4 722 aaPredicted RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 TFIP11Q9UBB9 837 aaKnown RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 SAP30BPQ9UHR5 308 aaKnown RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 ZNF646O15015 1829 aaPredicted RBP27.41■■□□□ 1.98
SNCB-201ENST00000310112 PPIP5K2O43314 1243 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 NPM3O75607 178 aaKnown RBP27.4■■□□□ 1.98
SNCB-201ENST00000310112 TSPY3P0CV98 308 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 TSPY8P0CW00 308 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 RASA1P20936 1047 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 KIF5BP33176 963 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 CDK8P49336 464 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 GUCY1B3Q02153 619 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 KIF23Q02241 960 aaPredicted RBP27.4■■□□□ 1.98
SNCB-201ENST00000310112 AOC3Q16853 763 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 KRT40Q6A162 431 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 MTFR1LQ9H019 292 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 RBM27Q9P2N5 1060 aaKnown RBP27.4■■□□□ 1.98
SNCB-201ENST00000310112 SERPINA10Q9UK55 444 aa27.4■■□□□ 1.98
SNCB-201ENST00000310112 F8W031 263 aaPredicted RBP27.39■■□□□ 1.98
SNCB-201ENST00000310112 PRPF3O43395 683 aaKnown RBP27.39■■□□□ 1.98
SNCB-201ENST00000310112 DPEP1P16444 411 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 XBP1P17861 261 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 KCNA3P22001 575 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 DYNLL2Q96FJ2 89 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 KAT14Q9H8E8 782 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 RTEL1Q9NZ71 1219 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 SWAP70Q9UH65 585 aa27.39■■□□□ 1.98
SNCB-201ENST00000310112 PSME4Q14997 1843 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 ECM29Q5VYK3 1845 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 GNAQP50148 359 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 EVX2Q03828 476 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 SAFBQ15424 915 aaKnown RBP eCLIP27.38■■□□□ 1.97
SNCB-201ENST00000310112 RCSD1Q6JBY9 416 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 APOBEC3HQ6NTF7 200 aaKnown RBP27.38■■□□□ 1.97
SNCB-201ENST00000310112 NEDD1Q8NHV4 660 aa27.38■■□□□ 1.97
SNCB-201ENST00000310112 WDHD1O75717 1129 aaPredicted RBP27.37■■□□□ 1.97
SNCB-201ENST00000310112 YEATS4O95619 227 aa27.37■■□□□ 1.97
SNCB-201ENST00000310112 CDC42EP5Q6NZY7 148 aa27.37■■□□□ 1.97
SNCB-201ENST00000310112 TMTC3Q6ZXV5 915 aa27.37■■□□□ 1.97
SNCB-201ENST00000310112 PPFIA3O75145 1194 aa27.36■■□□□ 1.97
SNCB-201ENST00000310112 LRSAM1Q6UWE0 723 aa27.36■■□□□ 1.97
SNCB-201ENST00000310112 ILDR1Q86SU0 546 aaPredicted RBP27.36■■□□□ 1.97
SNCB-201ENST00000310112 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
SNCB-201ENST00000310112 SCN9AQ15858 1988 aa27.36■■□□□ 1.97
SNCB-201ENST00000310112 PLIN4Q96Q06 1357 aa27.36■■□□□ 1.97
SNCB-201ENST00000310112 HLA-DOAP06340 250 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 U2AF2P26368 475 aaKnown RBP eCLIP27.35■■□□□ 1.97
SNCB-201ENST00000310112 SCNN1DP51172 638 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 FUT2Q10981 343 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 MYSM1Q5VVJ2 828 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 MXD3Q9BW11 206 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 OSBPL5Q9H0X9 879 aaPredicted RBP27.35■■□□□ 1.97
SNCB-201ENST00000310112 IL17RBQ9NRM6 502 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 PIM2Q9P1W9 311 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 GABPAQ06546 454 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 GNL2Q13823 731 aaKnown RBP27.35■■□□□ 1.97
SNCB-201ENST00000310112 PPP4R3BQ5MIZ7 849 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 OTUD7BQ6GQQ9 843 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 USP28Q96RU2 1077 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 IDI2Q9BXS1 227 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 EHD4Q9H223 541 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 DHX36Q9H2U1 1008 aaKnown RBP27.35■■□□□ 1.97
SNCB-201ENST00000310112 GRPEL1Q9HAV7 217 aa27.35■■□□□ 1.97
SNCB-201ENST00000310112 NOVP48745 357 aa27.34■■□□□ 1.97
SNCB-201ENST00000310112 PNMA1Q8ND90 353 aa27.34■■□□□ 1.97
SNCB-201ENST00000310112 KCNG4Q8TDN1 519 aa27.34■■□□□ 1.97
SNCB-201ENST00000310112 AIFM3Q96NN9 605 aa27.34■■□□□ 1.97
SNCB-201ENST00000310112 FOXP1Q9H334 677 aaPredicted RBP27.34■■□□□ 1.97
SNCB-201ENST00000310112 NMT2O60551 498 aa27.33■■□□□ 1.97
SNCB-201ENST00000310112 MMP1P03956 469 aa27.33■■□□□ 1.97
SNCB-201ENST00000310112 NASPP49321 788 aaPredicted RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms