RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 INO80BQ9C086 356 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 JADE2Q9NQC1 790 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ABCA9Q8IUA7 1624 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CARMIL3Q8ND23 1372 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ARHGEF35A5YM69 484 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SDSP20132 328 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CALCOCO2Q13137 446 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 HLTFQ14527 1009 aaKnown RBP eCLIP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 KCNV1Q6PIU1 500 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TTC39CQ8N584 583 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ACSBG1Q96GR2 724 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 DSCC1Q9BVC3 393 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GIGYF1O75420 1035 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 MCM4P33991 863 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ALCAMQ13740 583 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GCKRQ14397 625 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 MFSD14BQ5SR56 506 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FAM160B1Q5W0V3 765 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 APOBEC3FQ8IUX4 373 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 MRPS27Q92552 414 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC102AQ96A19 550 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 RAB3IPQ96QF0 476 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 EYA1Q99502 592 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TRIM62Q9BVG3 475 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FAM8A1Q9UBU6 413 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FAM169AQ9Y6X4 670 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TRPM1Q7Z4N2 1603 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PZPP20742 1482 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ZSCAN22P10073 491 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PPARGP37231 505 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ASPRV1Q53RT3 343 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC93Q567U6 631 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 RPGRIP1Q96KN7 1286 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC114Q96M63 670 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CUEDC2Q9H467 287 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 METTL14Q9HCE5 456 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 A0A1B0GUL7 405 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SPTLC2O15270 562 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 KLHL40Q2TBA0 621 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 USHBP1Q8N6Y0 703 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 PPFIBP2Q8ND30 876 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SLC16A10Q8TF71 515 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ZKSCAN3Q9BRR0 538 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SETBP1Q9Y6X0 1596 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 A0A1W2PRG0 241 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 FLOT1O75955 427 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 CIITAP33076 1130 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 VAV2P52735 878 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 CTSWP56202 376 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 FAM98CQ17RN3 349 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ATP6V0A1Q93050 837 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 FAM193BQ96PV7 902 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 AGLP35573 1532 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ELP1O95163 1332 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 LOC102724428A0A0B4J2F2 783 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 NPR1P16066 1061 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SCP2P22307 547 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 GJB2P29033 226 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 TRAPPC10P48553 1259 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SIK1P57059 783 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ORC2Q13416 577 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 TFDP1Q14186 410 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 KRT27Q7Z3Y8 459 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ZSCAN30Q86W11 494 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 RNF214Q8ND24 703 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SMC6Q96SB8 1091 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ESYT1Q9BSJ8 1104 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 TM6SF1Q9BZW5 370 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 GRPEL1Q9HAV7 217 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 BPIFB4P59827 614 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 IPO4Q8TEX9 1081 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 AP5M1Q9H0R1 490 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 MIS18AQ9NYP9 233 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 GON4LQ3T8J9 2241 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 KCTD2Q14681 263 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SEPT2Q15019 361 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SLC9C1Q4G0N8 1177 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 HS1BP3Q53T59 392 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 DALRD3Q5D0E6 543 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 RUFY3Q7L099 469 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 KCTD17Q8N5Z5 321 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 MLKLQ8NB16 471 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 LUC7L2Q9Y383 392 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 RBM8AQ9Y5S9 174 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 FRMPD1Q5SYB0 1578 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 QRICH2Q9H0J4 1663 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 F6X3S4 739 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SMARCA5O60264 1052 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ERCC5P28715 1186 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ASIC1P78348 528 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ARID5AQ03989 594 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 DMP1Q13316 513 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 DIP2AQ14689 1571 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 EFHBQ8N7U6 833 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 C2orf69Q8N8R5 385 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 KIFC2Q96AC6 838 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 RUNDC3BQ96NL0 473 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 NACC1Q96RE7 527 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SPINK5Q9NQ38 1064 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms