RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MINDY4BA8MYZ0 360 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 SLURP2P0DP57 97 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 BRI3BPQ8WY22 251 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 MS4A4AQ96JQ5 239 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 SEC62Q99442 399 aaKnown RBP23.67■■□□□ 1.38
VEGFB-201ENST00000309422 FEZ1Q99689 392 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 ZFYVE28Q9HCC9 887 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 CDK5RAP2Q96SN8 1893 aa23.67■■□□□ 1.38
VEGFB-201ENST00000309422 SDSP20132 328 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 PDE4AP27815 886 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 RAB3GAP1Q15042 981 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 TAF1CQ15572 869 aaPredicted RBP23.66■■□□□ 1.38
VEGFB-201ENST00000309422 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 TATDN1Q6P1N9 297 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 GADL1Q6ZQY3 521 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 TMOD4Q9NZQ9 345 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 MYH1P12882 1939 aa23.66■■□□□ 1.38
VEGFB-201ENST00000309422 DDX60LQ5H9U9 1706 aaKnown RBP23.66■■□□□ 1.38
VEGFB-201ENST00000309422 GSG1L2A8MUP6 293 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 IGF2BP3O00425 579 aaKnown RBP eCLIP23.65■■□□□ 1.38
VEGFB-201ENST00000309422 GH2P01242 217 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 CYP2D6P10635 497 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 PABPC4Q13310 644 aaKnown RBP eCLIP23.65■■□□□ 1.384e-7■■■■□ 22.9
VEGFB-201ENST00000309422 CTR9Q6PD62 1173 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 AFG3L2Q9Y4W6 797 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 NMIQ13287 307 aaPredicted RBP23.65■■□□□ 1.38
VEGFB-201ENST00000309422 SBK1Q52WX2 424 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 CCDC171Q6TFL3 1326 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 IFNL3Q8IZI9 196 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 CCDC17Q96LX7 622 aa23.65■■□□□ 1.38
VEGFB-201ENST00000309422 PARK7Q99497 189 aaKnown RBP23.65■■□□□ 1.38
VEGFB-201ENST00000309422 A0A0G2JLL6 359 aaPredicted RBP23.64■■□□□ 1.37
VEGFB-201ENST00000309422 TBC1D8O95759 1140 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 SHMT1P34896 483 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 GABPAQ06546 454 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 SPP2Q13103 211 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 PRRT2Q7Z6L0 340 aaPredicted RBP23.64■■□□□ 1.37
VEGFB-201ENST00000309422 ANKRD23Q86SG2 305 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 FAM227BQ96M60 508 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 PNMA3Q9UL41 463 aa23.64■■□□□ 1.37
VEGFB-201ENST00000309422 A0A0D9SFI3 127 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 PDE4BQ07343 736 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 CWC27Q6UX04 472 aaKnown RBP23.63■■□□□ 1.37
VEGFB-201ENST00000309422 CCDC129Q6ZRS4 1044 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 TMEM179Q6ZVK1 233 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 C16orf86Q6ZW13 317 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 WDR18Q9BV38 432 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 CFHR5Q9BXR6 569 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 SH2D4AQ9H788 454 aa23.63■■□□□ 1.37
VEGFB-201ENST00000309422 BTBD19C9JJ37 291 aa23.62■■□□□ 1.37
VEGFB-201ENST00000309422 USP14P54578 494 aa23.62■■□□□ 1.37
VEGFB-201ENST00000309422 CCDC84Q86UT8 332 aaPredicted RBP23.62■■□□□ 1.37
VEGFB-201ENST00000309422 PROCA1Q8NCQ7 364 aaPredicted RBP23.62■■□□□ 1.37
VEGFB-201ENST00000309422 DYNLL2Q96FJ2 89 aa23.62■■□□□ 1.37
VEGFB-201ENST00000309422 EPB41L4AQ9HCS5 686 aaPredicted RBP23.62■■□□□ 1.37
VEGFB-201ENST00000309422 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.62■■□□□ 1.37
VEGFB-201ENST00000309422 CYP2D7A0A087X1C5 515 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 C19orf81C9J6K1 198 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 USP17L10C9JJH3 530 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 PDHXO00330 501 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 CDK8P49336 464 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 MTMR2Q13614 643 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 SLC44A5Q8NCS7 719 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 SIPA1L1O43166 1804 aa23.61■■□□□ 1.37
VEGFB-201ENST00000309422 RAD50Q92878 1312 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 GSPT1P15170 499 aaKnown RBP23.6■■□□□ 1.37
VEGFB-201ENST00000309422 HMGCS2P54868 508 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 CRHR2Q13324 411 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 RRP1BQ14684 758 aaKnown RBP23.6■■□□□ 1.37
VEGFB-201ENST00000309422 NOM1Q5C9Z4 860 aaKnown RBP23.6■■□□□ 1.37
VEGFB-201ENST00000309422 FAM43AQ8N2R8 423 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 SMCR8Q8TEV9 937 aaPredicted RBP23.6■■□□□ 1.37
VEGFB-201ENST00000309422 PTPN18Q99952 460 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 ARHGEF10LQ9HCE6 1279 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 AGTPBP1Q9UPW5 1226 aa23.6■■□□□ 1.37
VEGFB-201ENST00000309422 ROBO3Q96MS0 1386 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 GPR25O00155 361 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 FKTNO75072 461 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 BACE1P56817 501 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 ARHGEF6Q15052 776 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 ZNF444Q8N0Y2 327 aaPredicted RBP23.59■■□□□ 1.37
VEGFB-201ENST00000309422 STK11IPQ8N1F8 1099 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 SLC45A1Q9Y2W3 748 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 LAMB1P07942 1786 aa23.59■■□□□ 1.37
VEGFB-201ENST00000309422 PPARAQ07869 468 aa23.58■■□□□ 1.37
VEGFB-201ENST00000309422 USP17L2Q6R6M4 530 aa23.58■■□□□ 1.37
VEGFB-201ENST00000309422 CASC1Q6TDU7 716 aa23.58■■□□□ 1.37
VEGFB-201ENST00000309422 OSBPP22059 807 aa23.57■■□□□ 1.36
VEGFB-201ENST00000309422 ICA1Q05084 483 aa23.57■■□□□ 1.36
VEGFB-201ENST00000309422 KIF22Q14807 665 aa23.57■■□□□ 1.36
VEGFB-201ENST00000309422 ERO1AQ96HE7 468 aa23.57■■□□□ 1.36
VEGFB-201ENST00000309422 ZMYM6O95789 1325 aa23.57■■□□□ 1.36
VEGFB-201ENST00000309422 IRX3P78415 501 aaPredicted RBP23.56■■□□□ 1.36
VEGFB-201ENST00000309422 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
VEGFB-201ENST00000309422 ATAD5Q96QE3 1844 aa23.56■■□□□ 1.36
VEGFB-201ENST00000309422 HSPD1P10809 573 aaKnown RBP23.55■■□□□ 1.36
VEGFB-201ENST00000309422 AKR1B1P15121 316 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms