RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 PKD2L1Q9P0L9 805 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 PFKFB2O60825 505 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 ZBTB21Q9ULJ3 1066 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 CLIC4Q9Y696 253 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 ERBB3P21860 1342 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 ZNF853P0CG23 659 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 USPL1Q5W0Q7 1092 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 C8orf74Q6P047 294 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 JAKMIP2Q96AA8 810 aa20.39■□□□□ 0.85
ATP2A2-201ENST00000308664 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 DTHD1Q6ZMT9 781 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 FCHSD1Q86WN1 690 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 CCDC155Q8N6L0 562 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 EHMT1Q9H9B1 1298 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 ERCC3P19447 782 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 CLIC6Q96NY7 704 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 GREM2Q9H772 168 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 CETN2P41208 172 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 LETM2Q2VYF4 491 aa20.38■□□□□ 0.85
ATP2A2-201ENST00000308664 GTF2IP78347 998 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 RRP36Q96EU6 259 aaKnown RBP20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 PLEKHA4Q9H4M7 779 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 SPDYE3A6NKU9 549 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 CTSWP56202 376 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 B4GALNT4Q76KP1 1039 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 TBCAO75347 108 aaKnown RBP20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 TMEM87BQ96K49 555 aa20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 NOC4LQ9BVI4 516 aaKnown RBP20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 DDX41Q9UJV9 622 aaKnown RBP20.37■□□□□ 0.85
ATP2A2-201ENST00000308664 PCDHA5Q9Y5H7 936 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 SYNMO15061 1565 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 BICDL2A1A5D9 508 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 CMA1P23946 247 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 RBM6P78332 1123 aaKnown RBP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 SF3A3Q12874 501 aaKnown RBP eCLIP20.36■□□□□ 0.853e-7■■□□□ 13.8
ATP2A2-201ENST00000308664 DEXIO95424 95 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 HNRNPH2P55795 449 aaKnown RBP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 FAM47AQ5JRC9 791 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 ZNF589Q86UQ0 364 aaPredicted RBP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 CMTR1Q8N1G2 835 aaKnown RBP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 ANKS4BQ8N8V4 417 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 USP6P35125 1406 aa20.36■□□□□ 0.85
ATP2A2-201ENST00000308664 H0YIN7 160 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 TGFBRAP1Q8WUH2 860 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 ZNF274Q96GC6 653 aaPredicted RBP20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 TLR7Q9NYK1 1049 aaKnown RBP20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 TRIM37O94972 964 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CYP21A2P08686 494 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CALML3P27482 149 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 PAK1Q13153 545 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 SDR42E1Q8WUS8 393 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 PAIP2Q9BPZ3 127 aaKnown RBP20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 KRT13P13646 458 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 NAA25Q14CX7 972 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 LONRF2Q1L5Z9 754 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CERS3Q8IU89 383 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CSGALNACT2Q8N6G5 542 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 TMEM87AQ8NBN3 555 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 USP17L21D6R901 530 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CDC25BP30305 580 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 UBLCP1Q8WVY7 318 aaPredicted RBP20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 RABGGTAQ92696 567 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 QTRT2Q9H974 415 aaKnown RBP20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
ATP2A2-201ENST00000308664 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 TRIM14Q14142 442 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 BLZF1Q9H2G9 400 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 LIG3P49916 1009 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 FNBP4Q8N3X1 1017 aaPredicted RBP20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 DSCC1Q9BVC3 393 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 NLRP1Q9C000 1473 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 TNNC1P63316 161 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 FBXO18Q8NFZ0 1043 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 GOLGA5Q8TBA6 731 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 SAR1BQ9Y6B6 198 aa20.34■□□□□ 0.85
ATP2A2-201ENST00000308664 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 PNMA6AP0CW24 399 aaPredicted RBP20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 HSPD1P10809 573 aaKnown RBP20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 PDIA3P30101 505 aaKnown RBP20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 ADORA1P30542 326 aa20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 BICD1Q96G01 975 aa20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 RCOR1Q9UKL0 485 aa20.33■□□□□ 0.85
ATP2A2-201ENST00000308664 MFSD14BQ5SR56 506 aa20.33■□□□□ 0.84
ATP2A2-201ENST00000308664 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.84
ATP2A2-201ENST00000308664 SECISBP2LQ93073 1101 aaKnown RBP20.33■□□□□ 0.84
ATP2A2-201ENST00000308664 PARP1P09874 1014 aaKnown RBP20.33■□□□□ 0.84
ATP2A2-201ENST00000308664 FBF1Q8TES7 1133 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms