RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.32
SSH3-202ENST00000308298 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
SSH3-202ENST00000308298 KCNJ14Q9UNX9 436 aa23.27■■□□□ 1.32
SSH3-202ENST00000308298 KLRG2A4D1S0 409 aaPredicted RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 BTBD18B2RXH4 712 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 LDHCP07864 332 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 IL1R1P14778 569 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 TROAPQ12815 778 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 GRIK5Q16478 980 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 NOL10Q9BSC4 688 aaKnown RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 PPP4CP60510 307 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 DIXDC1Q155Q3 683 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 SH3RF3Q8TEJ3 882 aaPredicted RBP23.26■■□□□ 1.31
SSH3-202ENST00000308298 SDF4Q9BRK5 362 aa23.26■■□□□ 1.31
SSH3-202ENST00000308298 MROH7-TTC4A0A0A0MT08 1334 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 ZNF500O60304 480 aaPredicted RBP23.25■■□□□ 1.31
SSH3-202ENST00000308298 NT5C2P49902 561 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 FAM47AQ5JRC9 791 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
SSH3-202ENST00000308298 PFKFB1P16118 471 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 FUT2Q10981 343 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 C12orf60Q5U649 245 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.25■■□□□ 1.31
SSH3-202ENST00000308298 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
SSH3-202ENST00000308298 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
SSH3-202ENST00000308298 TSPY2A6NKD2 308 aa23.24■■□□□ 1.31
SSH3-202ENST00000308298 PRPF3O43395 683 aaKnown RBP23.24■■□□□ 1.31
SSH3-202ENST00000308298 TMC4Q7Z404 712 aa23.24■■□□□ 1.31
SSH3-202ENST00000308298 ANO10Q9NW15 660 aa23.24■■□□□ 1.31
SSH3-202ENST00000308298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.24■■□□□ 1.31
SSH3-202ENST00000308298 ZNF202O95125 648 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 PLEKHA8P1O95397 391 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 XBP1P17861 261 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 C11orf57Q6ZUT1 292 aaPredicted RBP23.23■■□□□ 1.31
SSH3-202ENST00000308298 CERS3Q8IU89 383 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 TBC1D16Q8TBP0 767 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 NMT2O60551 498 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 RBM6P78332 1123 aaKnown RBP23.23■■□□□ 1.31
SSH3-202ENST00000308298 TMTC3Q6ZXV5 915 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 RTFDC1Q9BY42 306 aaPredicted RBP23.23■■□□□ 1.31
SSH3-202ENST00000308298 POLLQ9UGP5 575 aa23.23■■□□□ 1.31
SSH3-202ENST00000308298 CUTAO60888 179 aa23.22■■□□□ 1.31
SSH3-202ENST00000308298 PKN1Q16512 942 aa23.22■■□□□ 1.31
SSH3-202ENST00000308298 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
SSH3-202ENST00000308298 AMOTL1Q8IY63 956 aa23.22■■□□□ 1.31
SSH3-202ENST00000308298 CTCFLQ8NI51 663 aaPredicted RBP23.22■■□□□ 1.31
SSH3-202ENST00000308298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.21■■□□□ 1.31
SSH3-202ENST00000308298 IQCB1Q15051 598 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 HPSEQ9Y251 543 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 DDX60LQ5H9U9 1706 aaKnown RBP23.21■■□□□ 1.31
SSH3-202ENST00000308298 PPEF1O14829 653 aaPredicted RBP23.21■■□□□ 1.31
SSH3-202ENST00000308298 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
SSH3-202ENST00000308298 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 SLC4A8Q2Y0W8 1093 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 SHC4Q6S5L8 630 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 ANO8Q9HCE9 1232 aaPredicted RBP23.21■■□□□ 1.31
SSH3-202ENST00000308298 KIAA1468Q9P260 1216 aa23.21■■□□□ 1.31
SSH3-202ENST00000308298 FAM237AA0A1B0GTK4 181 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 NR5A1Q13285 461 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 TGFBRAP1Q8WUH2 860 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 TIGD1Q96MW7 591 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 CNTNAP5Q8WYK1 1306 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 C6orf229H3BNL8 230 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 SYKP43405 635 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 RESP18Q5W5W9 173 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 SP8Q8IXZ3 490 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 NLGN1Q8N2Q7 840 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 TBC1D22AQ8WUA7 517 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 ERCC4Q92889 916 aaPredicted RBP23.2■■□□□ 1.3
SSH3-202ENST00000308298 PHF20Q9BVI0 1012 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 VPS54Q9P1Q0 977 aa23.2■■□□□ 1.3
SSH3-202ENST00000308298 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
SSH3-202ENST00000308298 GOLGA6L19H0YKK7 550 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 PLSCR1O15162 318 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 BTDP43251 543 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 RCSD1Q6JBY9 416 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 CEP57L1Q8IYX8 460 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 MPNDQ8N594 471 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 OXER1Q8TDS5 423 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 SHISA4Q96DD7 197 aa23.19■■□□□ 1.3
SSH3-202ENST00000308298 GPR75-ASB3A0A0A6YYF3 556 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 TFAP4Q01664 338 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 MFSD14BQ5SR56 506 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 KRI1Q8N9T8 703 aaKnown RBP23.18■■□□□ 1.3
SSH3-202ENST00000308298 AKT1S1Q96B36 256 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 DYNLL2Q96FJ2 89 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 CLIC6Q96NY7 704 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 GOLGA6L6A8MZA4 724 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 NAT10Q9H0A0 1025 aaKnown RBP23.18■■□□□ 1.3
SSH3-202ENST00000308298 MKNK2Q9HBH9 465 aa23.18■■□□□ 1.3
SSH3-202ENST00000308298 hCG_1642624A0A1W2PR95 340 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 TPM3P06753 285 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 KRT2P35908 639 aa23.17■■□□□ 1.3
SSH3-202ENST00000308298 ZRSR1Q15695 479 aaKnown RBP23.17■■□□□ 1.3
SSH3-202ENST00000308298 PLA2G4DQ86XP0 818 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms