RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 CTGFP29279 349 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 ADD2P35612 726 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 MCM9Q9NXL9 1143 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 SLC45A1Q9Y2W3 748 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 GH2P01242 217 aa20.58■□□□□ 0.89
HMGCLL1-202ENST00000308161 BCRP11274 1271 aa20.58■□□□□ 0.89
HMGCLL1-202ENST00000308161 PLCD1P51178 756 aa20.58■□□□□ 0.89
HMGCLL1-202ENST00000308161 PROCA1Q8NCQ7 364 aaPredicted RBP20.58■□□□□ 0.89
HMGCLL1-202ENST00000308161 PNMA3Q9UL41 463 aa20.58■□□□□ 0.89
HMGCLL1-202ENST00000308161 NAV1Q8NEY1 1877 aa20.58■□□□□ 0.88
HMGCLL1-202ENST00000308161 WDR18Q9BV38 432 aa20.57■□□□□ 0.88
HMGCLL1-202ENST00000308161 TMOD4Q9NZQ9 345 aa20.57■□□□□ 0.88
HMGCLL1-202ENST00000308161 PRKAB2O43741 272 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 GNRH1P01148 92 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 OSBPP22059 807 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 FCGRTP55899 365 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 BACE1P56817 501 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 EVX2Q03828 476 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 PABPC4Q13310 644 aaKnown RBP eCLIP20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 RAB3GAP1Q15042 981 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 CERKLQ49MI3 558 aaPredicted RBP20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 ANKRD13CQ8N6S4 541 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 SH3TC2Q8TF17 1288 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 EHD4Q9H223 541 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 MYPNQ86TC9 1320 aa20.56■□□□□ 0.88
HMGCLL1-202ENST00000308161 USP17L10C9JJH3 530 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 CYP2D6P10635 497 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 HOXD10P28358 340 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 NBPF11Q86T75 865 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 RAET1EQ8TD07 263 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 FEZ1Q99689 392 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 DCP1AQ9NPI6 582 aaPredicted RBP20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 LOC285556D6RIA3 1793 aa20.55■□□□□ 0.88
HMGCLL1-202ENST00000308161 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 ABCB5Q2M3G0 1257 aa20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 TATDN1Q6P1N9 297 aa20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 DDX60LQ5H9U9 1706 aaKnown RBP20.54■□□□□ 0.88
HMGCLL1-202ENST00000308161 MPHOSPH10O00566 681 aaKnown RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 SHMT1P34896 483 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 PRMT2P55345 433 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 PRKCZQ05513 592 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 ZNF333Q96JL9 665 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 TMEM106CQ9BVX2 250 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 ASCC2Q9H1I8 757 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 CABP5Q9NP86 173 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 TNRC18O15417 2968 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
HMGCLL1-202ENST00000308161 MYH7P12883 1935 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 AMOTL1Q8IY63 956 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 SLC44A5Q8NCS7 719 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 DYNLL2Q96FJ2 89 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 DDRGK1Q96HY6 314 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 TAOK2Q9UL54 1235 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 GABRQQ9UN88 632 aa20.52■□□□□ 0.87
HMGCLL1-202ENST00000308161 CYP2D7A0A087X1C5 515 aa20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 USP17L2Q6R6M4 530 aa20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 KBTBD3Q8NAB2 608 aa20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 BIN2Q9UBW5 565 aaPredicted RBP20.51■□□□□ 0.87
HMGCLL1-202ENST00000308161 BRCA2P51587 3418 aa20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 GCLCP48506 637 aaPredicted RBP20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 GABPAQ06546 454 aa20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 ACER1Q8TDN7 264 aa20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
HMGCLL1-202ENST00000308161 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 MGAMO43451 1857 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 USP17L12C9JPN9 530 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 USP17L21D6R901 530 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 ERC2O15083 957 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 EN2P19622 333 aaPredicted RBP20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 GRK4P32298 578 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 SEPT2Q15019 361 aa20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 P2RX7Q99572 595 aaKnown RBP20.49■□□□□ 0.87
HMGCLL1-202ENST00000308161 BAZ2AQ9UIF9 1905 aaKnown RBP20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 TTC41PQ6P2S7 1318 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 SMIM22K7EJ46 135 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 PEX10O60683 326 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 FLT3LGP49771 235 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 HERVK_113P62684 666 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 COA7Q96BR5 231 aa20.48■□□□□ 0.87
HMGCLL1-202ENST00000308161 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 MX1P20591 662 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 HOXA7P31268 230 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 539 ms