RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RAB11FIP4Q86YS3 637 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 SLC44A5Q8NCS7 719 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 ESR2Q92731 530 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 TNPO1Q92973 898 aaKnown RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 NCOA5Q9HCD5 579 aaKnown RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 SMC3Q9UQE7 1217 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 MYO3BQ8WXR4 1341 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 GOLGA8BA8MQT2 603 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 IFIT3O14879 490 aaKnown RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 JAK2O60674 1132 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 PCP11498 1178 aaKnown RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 LIFRP42702 1097 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 CACNB3P54284 484 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 SEC23AQ15436 765 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 SGMS1Q86VZ5 419 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 NAP1L2Q9ULW6 460 aaPredicted RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 SBF1O95248 1867 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 TNKSO95271 1327 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 MYH8P13535 1937 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 RANBP6O60518 1105 aaKnown RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 SLC3A2P08195 630 aaKnown RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 NUCB2P80303 420 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 PLCB2Q00722 1185 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 PDE4BQ07343 736 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 FAM47AQ5JRC9 791 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 APOA5Q6Q788 366 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 ZFPM1Q8IX07 1006 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 NSUN7Q8NE18 718 aaKnown RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 SMARCC2Q8TAQ2 1214 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 PRMT6Q96LA8 375 aaPredicted RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 MTA3Q9BTC8 594 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 OSBPL5Q9H0X9 879 aaPredicted RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 PCNTO95613 3336 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 NMT2O60551 498 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 BRD1O95696 1058 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 RXRAP19793 462 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 WTAPQ15007 396 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 CIAPIN1Q6FI81 312 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 C16orf86Q6ZW13 317 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 AGBL3Q8NEM8 1001 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 MYL10Q9BUA6 226 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 TDRD3Q9H7E2 651 aaKnown RBP8.17□□□□□ -1.1
PTCD2-201ENST00000308077 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
PTCD2-201ENST00000308077 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 RASA1P20936 1047 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 SYT1P21579 422 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 CDK8P49336 464 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 GABPAQ06546 454 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
PTCD2-201ENST00000308077 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
PTCD2-201ENST00000308077 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
PTCD2-201ENST00000308077 UBAC1Q9BSL1 405 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 IDI2Q9BXS1 227 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 NID2Q14112 1375 aa8.16□□□□□ -1.1
PTCD2-201ENST00000308077 PTPDC1A2A3K4 754 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 CCDC69A6NI79 296 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 FZD9O00144 591 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 CA12O43570 354 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 CDC27P30260 824 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 SART3Q15020 963 aaKnown RBP8.15□□□□□ -1.1
PTCD2-201ENST00000308077 NFXL1Q6ZNB6 911 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 SH3BP5LQ7L8J4 393 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 MICU3Q86XE3 530 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTCD2-201ENST00000308077 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 IL17RBQ9NRM6 502 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
PTCD2-201ENST00000308077 ZNF541Q9H0D2 1346 aa8.15□□□□□ -1.1
PTCD2-201ENST00000308077 GREB1LQ9C091 1923 aaPredicted RBP8.15□□□□□ -1.1
PTCD2-201ENST00000308077 ERICH2A1L162 156 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 TSPY2A6NKD2 308 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 ZBTB43O43298 467 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 STX6O43752 255 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 ADD1P35611 737 aaKnown RBP8.15□□□□□ -1.11
PTCD2-201ENST00000308077 METAP2P50579 478 aaKnown RBP eCLIP8.15□□□□□ -1.11
PTCD2-201ENST00000308077 TFAP4Q01664 338 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 TCP10Q12799 353 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 RCSD1Q6JBY9 416 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 IQCA1Q86XH1 822 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 ZNF654Q8IZM8 581 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 ZBED3Q96IU2 234 aaPredicted RBP8.15□□□□□ -1.11
PTCD2-201ENST00000308077 CHAMP1Q96JM3 812 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 HDAC9Q9UKV0 1011 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms