RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RANBP6O60518 1105 aaKnown RBP13.86□□□□□ -0.19
TRIM40-205ENST00000307859 ZNF445P59923 1031 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 PDE4BQ07343 736 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 FAM173BQ6P4H8 233 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 PODNQ7Z5L7 613 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 ENAHQ8N8S7 591 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-205ENST00000307859 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 DAGLAQ9Y4D2 1042 aa13.86□□□□□ -0.19
TRIM40-205ENST00000307859 PRDM1O75626 825 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 LBX1P52954 281 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 FKBP1AP62942 108 aaKnown RBP13.85□□□□□ -0.19
TRIM40-205ENST00000307859 PPP2R5BQ15173 497 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 RTN1Q16799 776 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 ZSCAN23Q3MJ62 389 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 TTC6Q86TZ1 520 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
TRIM40-205ENST00000307859 TMEM63CQ9P1W3 806 aa13.85□□□□□ -0.19
TRIM40-205ENST00000307859 POTECB2RU33 542 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 IFNAR1P17181 557 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 TEX11Q8IYF3 940 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
TRIM40-205ENST00000307859 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-205ENST00000307859 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.2
TRIM40-205ENST00000307859 FOSBP53539 338 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 L1TD1Q5T7N2 865 aaKnown RBP13.83□□□□□ -0.2
TRIM40-205ENST00000307859 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
TRIM40-205ENST00000307859 FLT1P17948 1338 aa13.83□□□□□ -0.2
TRIM40-205ENST00000307859 GREB1LQ9C091 1923 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-205ENST00000307859 G3V3G9 751 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 DDAH1O94760 285 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 GUCY1B3Q02153 619 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 RASSF7Q02833 373 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 IFIT1BQ5T764 474 aaKnown RBP13.82□□□□□ -0.2
TRIM40-205ENST00000307859 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 FANCBQ8NB91 859 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 SUPT20HQ8NEM7 779 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 FBXW7Q969H0 707 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
TRIM40-205ENST00000307859 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 TTF2Q9UNY4 1162 aaKnown RBP13.82□□□□□ -0.2
TRIM40-205ENST00000307859 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 ECE2O60344 883 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 CALM1P0DP23 149 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 CALM2P0DP24 149 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 CALM3P0DP25 149 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 HSPA8P11142 646 aaKnown RBP13.82□□□□□ -0.2
TRIM40-205ENST00000307859 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 LEO1Q8WVC0 666 aaPredicted RBP13.82□□□□□ -0.2
TRIM40-205ENST00000307859 PHKBQ93100 1093 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 ALG1Q9BT22 464 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
TRIM40-205ENST00000307859 TSPY2A6NKD2 308 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 POLR3DP05423 398 aaPredicted RBP13.81□□□□□ -0.2
TRIM40-205ENST00000307859 VEGFBP49765 207 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 PLCD1P51178 756 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 SSRP1Q08945 709 aaKnown RBP13.81□□□□□ -0.2
TRIM40-205ENST00000307859 TROAPQ12815 778 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 FAM47AQ5JRC9 791 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 WASF1Q92558 559 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 ANKS1AQ92625 1134 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 MXD3Q9BW11 206 aa13.81□□□□□ -0.2
TRIM40-205ENST00000307859 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
TRIM40-205ENST00000307859 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
TRIM40-205ENST00000307859 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 KIF23Q02241 960 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-205ENST00000307859 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 BRAPQ7Z569 592 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 CRACR2BQ8N4Y2 399 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-205ENST00000307859 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
TRIM40-205ENST00000307859 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-205ENST00000307859 AIFM3Q96NN9 605 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms