RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ERLIN2O94905 339 aa15.17■□□□□ 0.02
SEC23A-201ENST00000307712 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
SEC23A-201ENST00000307712 BPIFA3Q9BQP9 254 aa15.17■□□□□ 0.02
SEC23A-201ENST00000307712 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 PLA2G4AP47712 749 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 MKNK2Q9HBH9 465 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
SEC23A-201ENST00000307712 A0A0G2JLW4 131 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 KIF28PB7ZC32 967 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 FOXN1O15353 648 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 ITGA6P23229 1130 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 NR5A1Q13285 461 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 FAM114A1Q8IWE2 563 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
SEC23A-201ENST00000307712 FAM71BQ8TC56 605 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 L2HGDHQ9H9P8 463 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 LIG3P49916 1009 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 MTF1Q14872 753 aa15.16■□□□□ 0.02
SEC23A-201ENST00000307712 ENOX1Q8TC92 643 aaKnown RBP15.16■□□□□ 0.02
SEC23A-201ENST00000307712 VAV2P52735 878 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 CASP8Q14790 479 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 PIK3AP1Q6ZUJ8 805 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 CSRNP2Q9H175 543 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 A2ML1A8K2U0 1454 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 MED23Q9ULK4 1368 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 IRS4O14654 1257 aaPredicted RBP15.15■□□□□ 0.02
SEC23A-201ENST00000307712 USP5P45974 858 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
SEC23A-201ENST00000307712 TRIML1Q8N9V2 468 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 FHOD1Q9Y613 1164 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 TRIM66O15016 1216 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 H2AFXP16104 143 aaPredicted RBP15.15■□□□□ 0.02
SEC23A-201ENST00000307712 INPP5BP32019 993 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 ARID5AQ03989 594 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 TRIM14Q14142 442 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 OR8K1Q8NGG5 319 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 EPN1Q9Y6I3 576 aaPredicted RBP15.15■□□□□ 0.02
SEC23A-201ENST00000307712 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
SEC23A-201ENST00000307712 CCDC40Q4G0X9 1142 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 CFAP58Q5T655 872 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
SEC23A-201ENST00000307712 ERCC3P19447 782 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 RNASE9P60153 205 aaKnown RBP15.14■□□□□ 0.01
SEC23A-201ENST00000307712 NCAPH2Q6IBW4 605 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 BICDL1Q6ZP65 573 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 MED4Q9NPJ6 270 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
SEC23A-201ENST00000307712 RNF40O75150 1001 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 KIF5BP33176 963 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 CAVIN4Q5BKX8 364 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 AKNAD1Q5T1N1 836 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 ZNF609O15014 1411 aa15.14■□□□□ 0.01
SEC23A-201ENST00000307712 CASP1P29466 404 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 SEPT11Q9NVA2 429 aaKnown RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 PDE6AP16499 860 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 ERCC5P28715 1186 aaPredicted RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 CCT5P48643 541 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 CSGALNACT2Q8N6G5 542 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 BCAS4Q8TDM0 211 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 TSG101Q99816 390 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 PARP3Q9Y6F1 533 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 KCNJ18B7U540 433 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 FGFR1OPO95684 399 aaKnown RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 PHKG2P15735 406 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 AMPD3Q01432 767 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 KCNJ12Q14500 433 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 TTC19Q6DKK2 380 aaPredicted RBP15.13■□□□□ 0.01
SEC23A-201ENST00000307712 DTHD1Q6ZMT9 781 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 KAT14Q9H8E8 782 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 STX8Q9UNK0 236 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 MRFAP1Q9Y605 127 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
SEC23A-201ENST00000307712 TEX33O43247 280 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 CEP57Q86XR8 500 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 CALML4Q96GE6 196 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.12■□□□□ 0.01
SEC23A-201ENST00000307712 MORC3Q14149 939 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 RESP18Q5W5W9 173 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 SYMPKQ92797 1274 aaKnown RBP15.12■□□□□ 0.01
SEC23A-201ENST00000307712 NOC4LQ9BVI4 516 aaKnown RBP15.12■□□□□ 0.01
SEC23A-201ENST00000307712 KCNJ6P48051 423 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 GOPCQ9HD26 462 aa15.12■□□□□ 0.01
SEC23A-201ENST00000307712 HEATR3Q7Z4Q2 680 aa15.11■□□□□ 0.01
SEC23A-201ENST00000307712 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
SEC23A-201ENST00000307712 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms