RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CCNT1O60563 726 aaKnown RBP14.8□□□□□ -0.04
TRIM56-201ENST00000306085 CAPN12Q6ZSI9 719 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 IRAK4Q9NWZ3 460 aa14.8□□□□□ -0.04
TRIM56-201ENST00000306085 PYGLP06737 847 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 GABPB1Q06547 395 aaPredicted RBP14.79□□□□□ -0.04
TRIM56-201ENST00000306085 TRIM14Q14142 442 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 ATP6V0A1Q93050 837 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 TTF2Q9UNY4 1162 aaKnown RBP14.79□□□□□ -0.04
TRIM56-201ENST00000306085 BLVRAP53004 296 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 DAB2P98082 770 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 ZGPATQ8N5A5 531 aaKnown RBP14.79□□□□□ -0.04
TRIM56-201ENST00000306085 MAPK8IP1Q9UQF2 711 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 NBPF5PQ86XG9 351 aaPredicted RBP14.79□□□□□ -0.04
TRIM56-201ENST00000306085 OATP04181 439 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 NVLO15381 856 aaKnown RBP14.79□□□□□ -0.04
TRIM56-201ENST00000306085 IQUBQ8NA54 791 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 MYO1AQ9UBC5 1043 aa14.79□□□□□ -0.04
TRIM56-201ENST00000306085 PMS1P54277 932 aaKnown RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 C16orf71Q8IYS4 520 aaPredicted RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 PAWRQ96IZ0 340 aaKnown RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 IFNB1P01574 187 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 ECE1P42892 770 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 THAP12O43422 761 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 KRT19P08727 400 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 FLOT2Q14254 428 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 ALDH1L2Q3SY69 923 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 ACBD5Q5T8D3 534 aaPredicted RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 GRAMD4Q6IC98 578 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 S100BP04271 92 aaPredicted RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 GFAPP14136 432 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 NR1H4Q96RI1 486 aaPredicted RBP14.78□□□□□ -0.04
TRIM56-201ENST00000306085 CARD6Q9BX69 1037 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 GNA11P29992 359 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 MAEAQ7L5Y9 396 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 GNGT1P63211 74 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 FAM69CQ0P6D2 419 aa14.78□□□□□ -0.04
TRIM56-201ENST00000306085 PPFIA4O75335 1185 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 SLFN5Q08AF3 891 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 SPOUT1Q5T280 376 aaKnown RBP14.77□□□□□ -0.04
TRIM56-201ENST00000306085 HLA-DPA1P20036 260 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 POLE2P56282 527 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 CCDC68Q9H2F9 335 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 ITM2BQ9Y287 266 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 PARD3BQ8TEW8 1205 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 SLC9A5Q14940 896 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 TBC1D7Q9P0N9 293 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 PARP2Q9UGN5 583 aa14.77□□□□□ -0.04
TRIM56-201ENST00000306085 H3BRJ5 948 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 LMNAP02545 664 aaKnown RBP14.77□□□□□ -0.05
TRIM56-201ENST00000306085 TRIM59Q8IWR1 403 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 SCYL3Q8IZE3 742 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 MAD1L1Q9Y6D9 718 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 NUCB1Q02818 461 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 SLC9C1Q4G0N8 1177 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 PPP1R42Q7Z4L9 355 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 TRIM50Q86XT4 487 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRIM56-201ENST00000306085 E9PMD0 336 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 CCDC152Q4G0S7 254 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 WIZO95785 1651 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 NACADO15069 1562 aa14.77□□□□□ -0.05
TRIM56-201ENST00000306085 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-201ENST00000306085 CDAN1Q8IWY9 1227 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 RPS6KA1Q15418 735 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 RFC4P35249 363 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 MYL5Q02045 173 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 SUCLA2Q9P2R7 463 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-201ENST00000306085 INTUQ9ULD6 942 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 LMNB2Q03252 620 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 TTC19Q6DKK2 380 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-201ENST00000306085 YY1AP1Q9H869 796 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 PTPRCP08575 1304 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 MAGEB6P1A0A0J9YX57 407 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 CENPKQ9BS16 269 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 ZSCAN32Q9NX65 697 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 RXRAP19793 462 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 HS1BP3Q53T59 392 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 FLOT1O75955 427 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 PTPRGP23470 1445 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 FAM180AQ6UWF9 173 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 CEP70Q8NHQ1 597 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
TRIM56-201ENST00000306085 NOP56O00567 594 aaKnown RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 ZNF174Q15697 407 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 ABL1P00519 1130 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 ZFXP17010 805 aaPredicted RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 A0A1B0GVL5 298 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms