RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 COL9A1P20849 921 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 BACE1P56817 501 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 RTP1P59025 263 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 ERVK-24P63145 666 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 MECOMQ03112 1051 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 SHHQ15465 462 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-201ENST00000304990 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-201ENST00000304990 MRS2Q9HD23 443 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
COL4A3-201ENST00000304990 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 MSCO60682 206 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 ASNSP08243 561 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 ADORA1P30542 326 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-201ENST00000304990 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-201ENST00000304990 RHBDL3P58872 404 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 ATP2B2Q01814 1243 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-201ENST00000304990 EDC3Q96F86 508 aaKnown RBP12.47□□□□□ -0.41
COL4A3-201ENST00000304990 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 PORCNQ9H237 461 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 DDX20Q9UHI6 824 aaKnown RBP12.47□□□□□ -0.41
COL4A3-201ENST00000304990 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
COL4A3-201ENST00000304990 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
COL4A3-201ENST00000304990 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.41
COL4A3-201ENST00000304990 CCNA1P78396 465 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 RRP1BQ14684 758 aaKnown RBP12.46□□□□□ -0.41
COL4A3-201ENST00000304990 Q3C1V9 767 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 MORN1Q5T089 497 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 GORABQ5T7V8 394 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 LPAR1Q92633 364 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 RAI14Q9P0K7 980 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
COL4A3-201ENST00000304990 PDS5AQ29RF7 1337 aaKnown RBP12.45□□□□□ -0.42
COL4A3-201ENST00000304990 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
COL4A3-201ENST00000304990 DNM1LO00429 736 aa12.45□□□□□ -0.42
COL4A3-201ENST00000304990 TIMM10P62072 90 aa12.45□□□□□ -0.42
COL4A3-201ENST00000304990 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
COL4A3-201ENST00000304990 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
COL4A3-201ENST00000304990 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
COL4A3-201ENST00000304990 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
COL4A3-201ENST00000304990 USP6NLQ92738 828 aa12.45□□□□□ -0.42
COL4A3-201ENST00000304990 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 GJC2Q5T442 439 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 ARRDC4Q8NCT1 418 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 BADQ92934 168 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 FEZ1Q99689 392 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 DHX36Q9H2U1 1008 aaKnown RBP12.44□□□□□ -0.42
COL4A3-201ENST00000304990 PA2G4Q9UQ80 394 aaKnown RBP12.44□□□□□ -0.42
COL4A3-201ENST00000304990 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
COL4A3-201ENST00000304990 RLFQ13129 1914 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 A0A1B0GUL7 405 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 GDF11O95390 407 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
COL4A3-201ENST00000304990 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 XAGE2Q96GT9 111 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 TTYH1Q9H313 450 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-201ENST00000304990 LRP2BPQ9P2M1 347 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
COL4A3-201ENST00000304990 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 SLC15A5A6NIM6 579 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 BAG3O95817 575 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 PTPREP23469 700 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 CYP2C19P33261 490 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 TRIM60Q495X7 471 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 SLC39A5Q6ZMH5 540 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-201ENST00000304990 NSUN4Q96CB9 384 aaKnown RBP12.42□□□□□ -0.42
COL4A3-201ENST00000304990 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
COL4A3-201ENST00000304990 FLRT1Q9NZU1 646 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
COL4A3-201ENST00000304990 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 ZBTB22O15209 634 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms