RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 CALM2P0DP24 149 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 CALM3P0DP25 149 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 SLF2Q8IX21 1173 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 ARID3AQ99856 593 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 TJP1Q07157 1748 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 PPEF1O14829 653 aaPredicted RBP17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 PTGS1P23219 599 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 KRT2P35908 639 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 AFMP43652 599 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 SHANK3Q9BYB0 1731 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
PPP4R4-201ENST00000304338 TM4SF1P30408 202 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 PNMA1Q8ND90 353 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 FAM217BQ9NTX9 383 aaPredicted RBP17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 MCM7P33993 719 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 CPVLQ9H3G5 476 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 KCNH3Q9ULD8 1083 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 MMP1P03956 469 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 RILPL1Q5EBL4 403 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 ZNF592Q92610 1267 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
PPP4R4-201ENST00000304338 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 WDHD1O75717 1129 aaPredicted RBP17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 SERPINC1P01008 464 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 PCDHB6Q9Y5E3 794 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 MARCH6O60337 910 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 PNOCQ13519 176 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 NTRK3Q16288 839 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 DHX58Q96C10 678 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 RBM28Q9NW13 759 aaKnown RBP17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 TCP10Q12799 353 aa17.3■□□□□ 0.36
PPP4R4-201ENST00000304338 CCDC194A0A1B0GVG4 234 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 DDR1Q08345 913 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 FAM205CA6NFA0 338 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 KIAA1468Q9P260 1216 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 VWA3AA6NCI4 1184 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 CMA1P23946 247 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 TPD52L1Q16890 204 aaPredicted RBP17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 EYA3Q99504 573 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
PPP4R4-201ENST00000304338 STAMQ92783 540 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 PLCD1P51178 756 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 DPCR1Q3MIW9 517 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 RASGRP4Q8TDF6 673 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 NRDCO43847 1150 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
PPP4R4-201ENST00000304338 PES1O00541 588 aaKnown RBP17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 PLCG2P16885 1265 aa17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 NRBP1Q9UHY1 535 aa17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.36
PPP4R4-201ENST00000304338 SNW1Q13573 536 aaKnown RBP17.27■□□□□ 0.35
PPP4R4-201ENST00000304338 CCDC96Q2M329 555 aa17.27■□□□□ 0.35
PPP4R4-201ENST00000304338 PAPPAQ13219 1627 aa17.27■□□□□ 0.35
PPP4R4-201ENST00000304338 FUCA2Q9BTY2 467 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 CUTAO60888 179 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 DHX8Q14562 1220 aaKnown RBP17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 CACNB3P54284 484 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 PLIN2Q99541 437 aa17.26■□□□□ 0.35
PPP4R4-201ENST00000304338 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 GRAMD1CQ8IYS0 662 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 CAVIN2O95810 425 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 SCG2P13521 617 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 RXRBP28702 533 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 NAPAP54920 295 aa17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
PPP4R4-201ENST00000304338 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms